Variation Browser

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Receptor Position GPCRdb Segment Variant Mutation type Allele Frequency Allele Count Allele Number Homozygotes SIFT score PolyPhen score Functional annotation
Receptor Position GPCRdb Segment Variant Mutation Type Allele Frequency Allele Count Allele Number Homozygotes SIFT score PolyPhen score Functional annotation
taar1_human 339 C-term S => Ter stop gained 1.744e-05 1 57342 0 None None
taar1_human 324 C-term F => SerfsTer14 frameshift 9.236e-06 1 108270 0 None None
taar1_human 320 8.59x59 H8 F => LeufsTer18 frameshift 3.523e-05 4 113552 0 None None
taar1_human 291 7.40x39 TM7 W => Ter stop gained 0.0001408 17 120742 0 None None
taar1_human 258 6.42x42 TM6 G => Ter stop gained 8.265e-06 1 120998 0 None None
taar1_human 246 6.30x30 TM6 E => GlyfsTer4 frameshift 1.653e-05 2 120978 0 None None SodiumPocket MicroSwitch
taar1_human 229 5.77x77 TM5 Q => Ter stop gained 8.277e-06 1 120818 0 None None
taar1_human 227 5.75x75 TM5 A => ProfsTer11 frameshift 1.656e-05 2 120784 0 None None GP (contact)
taar1_human 210 5.58x58 TM5 Y => IlefsTer14 frameshift 8.292e-06 1 120600 0 None None SodiumPocket MicroSwitch
taar1_human 187 5.35x36 TM5 S => Ter frameshift 8.29e-06 1 120628 0 None None
taar1_human 61 2.42x42 TM2 L => SerfsTer22 frameshift 0.0001815 22 121192 0 None None
taar1_human 53 12.49x49 ICL1 Q => AsnfsTer30 frameshift 1.65e-05 2 121244 0 None None
taar1_human 18 N-term W => Ter stop gained 1.664e-05 2 120212 0 None None
taar1_human 330 C-term R => T missense 1.045e-05 1 95664 0 0.89 0.009
taar1_human 327 C-term D => V missense 9.635e-06 1 103790 0 0.02 0.323
taar1_human 325 C-term Q => E missense 9.29e-06 1 107644 0 0.28 0.15
taar1_human 318 8.57x57 H8 M => T missense 8.558e-06 1 116854 0 0.02 0.0
taar1_human 315 8.54x54 H8 L => P missense 8.455e-06 1 118270 0 0.0 0.88
taar1_human 302 7.51x51 TM7 M => T missense 3.321e-05 4 120430 0 0.0 0.158
taar1_human 300 7.49x49 TM7 N => K missense 0.0008795 106 120518 1 0.0 0.996 SodiumPocket MicroSwitch
taar1_human 300 7.49x49 TM7 N => S missense 8.296e-06 1 120538 0 0.0 0.996 SodiumPocket MicroSwitch
taar1_human 299 7.48x48 TM7 F => S missense 8.294e-06 1 120570 0 0.04 0.356
taar1_human 298 7.47x47 TM7 T => A missense 1.658e-05 2 120608 0 0.3 0.012
taar1_human 293 7.42x41 TM7 G => R missense 8.283e-06 1 120722 0 0.01 0.988
taar1_human 287 7.36x35 TM7 D => V missense 8.273e-06 1 120876 0 0.01 0.491
taar1_human 283 7.32x31 TM7 P => S missense 8.275e-06 1 120848 0 0.34 0.014
taar1_human 280 ECL3 I => V missense 8.274e-06 1 120864 0 0.12 0.0
taar1_human 276 6.60x60 TM6 F => I missense 1.655e-05 2 120874 0 0.08 0.759
taar1_human 275 6.59x59 TM6 P => L missense 2.482e-05 3 120860 0 0.03 0.992
taar1_human 275 6.59x59 TM6 P => T missense 1.655e-05 2 120862 0 0.0 0.994
taar1_human 273 6.57x57 TM6 M => V missense 8.273e-06 1 120882 0 0.48 0.003
taar1_human 272 6.56x56 TM6 V => I missense 8.274e-06 1 120856 0 1.0 0.006
taar1_human 269 6.53x53 TM6 I => N missense 8.273e-05 10 120870 0 0.0 0.516
taar1_human 266 6.50x50 TM6 P => S missense 8.267e-06 1 120968 0 0.0 1.0 SodiumPocket MicroSwitch
taar1_human 266 6.50x50 TM6 P => A missense 8.267e-06 1 120968 0 0.0 1.0 SodiumPocket MicroSwitch
taar1_human 264 6.48x48 TM6 W => L missense 8.265e-06 1 120994 0 0.0 0.951 SodiumPocket MicroSwitch
taar1_human 263 6.47x47 TM6 C => G missense 8.265e-06 1 120996 0 0.0 0.989
taar1_human 255 6.39x39 TM6 I => T missense 8.264e-06 1 121006 0 0.03 0.169
taar1_human 253 6.37x37 TM6 L => W missense 8.264e-06 1 121004 0 0.0 1.0 GP (contact)
taar1_human 253 6.37x37 TM6 L => V missense 8.264e-06 1 121014 0 0.0 0.986 GP (contact)
taar1_human 252 6.36x36 TM6 T => I missense 8.264e-06 1 121000 0 0.0 0.996 GP (contact)
taar1_human 252 6.36x36 TM6 T => A missense 0.001116 135 121008 0 0.02 0.999 GP (contact)
taar1_human 249 6.33x33 TM6 A => T missense 1.653e-05 2 120978 0 0.0 0.999 GP (contact)
taar1_human 247 6.31x31 TM6 R => T missense 1.653e-05 2 120976 0 0.15 0.034
taar1_human 247 6.31x31 TM6 R => K missense 8.266e-06 1 120976 0 0.26 0.02
taar1_human 245 6.29x29 TM6 K => E missense 8.266e-06 1 120978 0 0.11 0.219 GP (contact)
taar1_human 244 6.28x28 TM6 S => N missense 0.0006118 74 120954 1 0.51 0.004 GP (contact)
taar1_human 238 ICL3 K => R missense 4.135e-05 5 120930 0 0.27 0.008
taar1_human 237 ICL3 M => I missense 1.654e-05 2 120912 0 0.2 0.011
taar1_human 234 ICL3 G => R missense 8.274e-06 1 120856 0 0.33 0.013
taar1_human 229 5.77x77 TM5 Q => R missense 8.275e-06 1 120842 0 0.61 0.004
taar1_human 227 5.75x75 TM5 A => G missense 8.279e-06 1 120784 0 0.5 0.008 GP (contact)
taar1_human 227 5.75x75 TM5 A => S missense 8.28e-06 1 120778 0 0.63 0.052 GP (contact)
taar1_human 222 5.70x70 TM5 R => S missense 8.282e-06 1 120746 0 0.0 0.217
taar1_human 222 5.70x70 TM5 R => I missense 8.282e-06 1 120742 0 0.0 0.141
taar1_human 220 5.68x68 TM5 Q => P missense 8.283e-06 1 120732 0 0.02 0.992 GP (contact)
taar1_human 218 5.66x66 TM5 K => I missense 8.283e-06 1 120724 0 0.0 0.595 GP (contact)
taar1_human 218 5.66x66 TM5 K => E missense 8.285e-06 1 120706 0 0.02 0.03 GP (contact)
taar1_human 217 5.65x65 TM5 A => T missense 0.000174 21 120678 0 0.0 1.0 GP (contact)
taar1_human 217 5.65x65 TM5 A => S missense 1.657e-05 2 120678 0 0.24 1.0 GP (contact)
taar1_human 212 5.60x60 TM5 R => T missense 8.291e-06 1 120606 0 0.0 0.857
taar1_human 198 5.46x461 TM5 S => Y missense 1.659e-05 2 120532 0 0.03 0.883
taar1_human 197 5.45x46 TM5 T => I missense 2.489e-05 3 120520 0 1.0 0.002
taar1_human 195 5.43x44 TM5 F => L missense 4.147e-05 5 120578 0 0.13 0.038
taar1_human 190 5.38x39 TM5 S => C missense 8.292e-06 1 120604 0 0.12 0.778
taar1_human 182 45.50x50 ECL2 C => F missense 4.143e-05 5 120680 0 0.0 0.986
taar1_human 181 ECL2 G => V missense 0.0001657 20 120670 0 0.39 0.027
taar1_human 174 ECL2 K => Q missense 8.288e-06 1 120654 0 0.56 0.014
taar1_human 174 ECL2 K => E missense 1.658e-05 2 120654 0 1.0 0.008
taar1_human 173 ECL2 Y => H missense 0.0002569 31 120652 0 0.44 0.013
taar1_human 172 ECL2 Y => C missense 0.000547 66 120650 3 0.0 0.967
taar1_human 172 ECL2 Y => D missense 8.289e-06 1 120640 0 0.0 0.956
taar1_human 171 ECL2 I => L missense 0.0001907 23 120638 0 0.61 0.002
taar1_human 170 ECL2 E => K missense 8.29e-06 1 120622 0 0.07 0.052
taar1_human 169 ECL2 E => A missense 8.291e-06 1 120610 0 0.02 0.904
taar1_human 168 ECL2 A => S missense 8.29e-06 1 120620 0 0.19 0.049
taar1_human 167 ECL2 G => D missense 4.974e-05 6 120636 0 0.01 0.982
taar1_human 167 ECL2 G => S missense 8.289e-06 1 120638 0 0.02 0.992
taar1_human 162 4.64x64 TM4 E => D missense 1.658e-05 2 120640 0 0.11 0.02
taar1_human 162 4.64x64 TM4 E => Q missense 8.29e-06 1 120622 0 0.06 0.1
taar1_human 159 4.61x61 TM4 I => T missense 3.314e-05 4 120702 0 0.0 0.491
taar1_human 159 4.61x61 TM4 I => N missense 1.657e-05 2 120702 0 0.0 0.981
taar1_human 158 4.60x60 TM4 M => I missense 8.286e-06 1 120688 0 0.14 0.042
taar1_human 154 4.56x56 TM4 F => L missense 9.935e-05 12 120784 0 0.09 0.013
taar1_human 152 4.54x54 TM4 A => D missense 8.279e-06 1 120792 0 0.03 0.824
taar1_human 151 4.53x53 TM4 P => A missense 8.277e-06 1 120812 0 0.11 0.789
taar1_human 135 34.57x57 ICL2 M => I missense 8.274e-06 1 120854 0 1.0 0.006 GP (contact)
taar1_human 134 34.56x56 ICL2 K => E missense 8.273e-06 1 120874 0 0.0 0.794 PTM (Methylation) GP (contact)
taar1_human 129 34.51x51 ICL2 L => P missense 4.136e-05 5 120894 0 0.0 1.0 GP (contact)
taar1_human 123 3.52x52 TM3 Y => C missense 0.0001075 13 120924 0 0.05 0.182
taar1_human 123 3.52x52 TM3 Y => H missense 1.654e-05 2 120918 0 0.01 0.417
taar1_human 121 3.50x50 TM3 R => L missense 8.27e-06 1 120912 0 0.0 0.997 SodiumPocket MicroSwitch GP (contact)
taar1_human 121 3.50x50 TM3 R => C missense 0.0001406 17 120926 0 0.03 0.999 SodiumPocket MicroSwitch GP (contact)
taar1_human 119 3.48x48 TM3 I => F missense 4.134e-05 5 120938 0 0.0 0.103
taar1_human 117 3.46x46 TM3 I => V missense 8.268e-06 1 120944 0 0.14 0.923
taar1_human 115 3.44x44 TM3 S => C missense 4.134e-05 5 120940 0 1.0 0.028
taar1_human 115 3.44x44 TM3 S => F missense 8.269e-06 1 120940 0 0.07 0.964
taar1_human 113 3.42x42 TM3 H => R missense 0.0001075 13 120954 0 0.0 0.992
taar1_human 109 3.38x38 TM3 A => V missense 8.265e-06 1 120988 0 0.3 0.35
taar1_human 104 3.33x33 TM3 I => V missense 0.0002231 27 120998 0 0.28 0.177
taar1_human 103 3.32x32 TM3 D => N missense 8.264e-06 1 121006 0 0.01 0.999
taar1_human 100 3.29x29 TM3 T => I missense 1.653e-05 2 121016 0 0.04 0.213
taar1_human 100 3.29x29 TM3 T => A missense 8.264e-06 1 121014 0 0.18 0.142
taar1_human 99 3.28x28 TM3 H => R missense 1.653e-05 2 121028 0 0.0 0.456
taar1_human 98 3.27x27 TM3 I => T missense 8.262e-06 1 121036 0 0.0 0.809
taar1_human 94 3.23x23 TM3 V => A missense 4.13e-05 5 121060 0 0.08 0.102
taar1_human 94 3.23x23 TM3 V => L missense 8.26e-06 1 121066 0 1.0 0.001
taar1_human 80 2.61x60 TM2 S => G missense 8.255e-06 1 121136 0 0.02 0.791
taar1_human 78 2.59x58 TM2 P => S missense 8.255e-06 1 121136 0 0.0 0.997
taar1_human 77 2.58x57 TM2 M => L missense 8.254e-06 1 121156 0 0.03 0.679
taar1_human 74 2.55x55 TM2 C => Y missense 8.254e-06 1 121150 0 0.54 0.021
taar1_human 72 2.53x53 TM2 L => P missense 8.253e-06 1 121166 0 0.0 0.994
taar1_human 69 2.50x50 TM2 D => G missense 8.252e-06 1 121176 0 0.01 1.0
taar1_human 65 2.46x46 TM2 M => I missense 8.252e-06 1 121188 0 0.01 0.403
taar1_human 64 2.45x45 TM2 S => F missense 3.301e-05 4 121188 0 0.0 1.0
taar1_human 63 2.44x44 TM2 H => N missense 2.475e-05 3 121198 0 0.03 0.008
taar1_human 59 2.40x40 TM2 N => D missense 1.65e-05 2 121202 0 0.0 0.999
taar1_human 58 2.39x39 TM2 T => K missense 8.25e-06 1 121210 0 0.03 0.98
taar1_human 55 12.51x51 ICL1 H => R missense 8.249e-05 10 121230 0 0.01 0.679
taar1_human 51 1.60x60 TM1 F => L missense 6.598e-05 8 121242 0 0.0 0.999
taar1_human 50 1.59x59 TM1 H => Q missense 8.248e-06 1 121246 0 0.01 0.61
taar1_human 49 1.58x58 TM1 S => L missense 0.0003794 46 121246 0 0.13 0.004
taar1_human 48 1.57x57 TM1 I => T missense 8.249e-06 1 121234 0 0.0 0.903
taar1_human 47 1.56x56 TM1 S => C missense 9.897e-05 12 121246 0 0.0 0.829
taar1_human 45 1.54x54 TM1 I => M missense 8.247e-06 1 121262 0 0.07 0.644
taar1_human 42 1.51x51 TM1 L => M missense 2.474e-05 3 121282 0 0.16 0.724
taar1_human 41 1.50x50 TM1 N => D missense 8.245e-06 1 121288 0 0.0 1.0
taar1_human 40 1.49x49 TM1 G => S missense 8.245e-06 1 121292 0 0.01 1.0
taar1_human 39 1.48x48 TM1 V => I missense 1.649e-05 2 121292 0 0.5 0.003
taar1_human 38 1.47x47 TM1 L => I missense 8.244e-06 1 121296 0 0.49 0.002
taar1_human 38 1.47x47 TM1 L => F missense 2.473e-05 3 121296 0 0.03 0.014
taar1_human 36 1.45x45 TM1 T => N missense 8.244e-06 1 121296 0 0.0 0.243
taar1_human 36 1.45x45 TM1 T => A missense 1.649e-05 2 121298 0 0.26 0.002
taar1_human 28 1.37x37 TM1 S => C missense 0.0006102 74 121264 2 0.18 0.008
taar1_human 26 1.35x35 TM1 L => R missense 4.126e-05 5 121196 0 0.0 0.903
taar1_human 24 1.33x33 TM1 A => T missense 8.262e-06 1 121034 0 0.35 0.045
taar1_human 23 1.32x32 TM1 R => H missense 0.000157 19 121016 0 0.06 0.028
taar1_human 23 1.32x32 TM1 R => L missense 8.263e-06 1 121016 0 0.09 0.491
taar1_human 23 1.32x32 TM1 R => C missense 0.001546 187 120980 1 0.03 0.048
taar1_human 20 N-term N => S missense 8.297e-06 1 120526 0 0.76 0.002
taar1_human 18 N-term W => C missense 8.319e-06 1 120212 0 0.15 0.447
taar1_human 18 N-term W => G missense 0.001324 159 120096 1 0.26 0.053
taar1_human 18 N-term W => R missense 1.665e-05 2 120096 0 0.94 0.001
taar1_human 16 N-term N => S missense 8.365e-06 1 119550 0 1.0 0.0
taar1_human 16 N-term N => Y missense 8.374e-06 1 119424 0 0.37 0.001
taar1_human 13 N-term C => Y missense 8.437e-06 1 118524 0 0.01 0.094
taar1_human 9 N-term I => N missense 2.561e-05 3 117158 0 0.15 0.007
taar1_human 3 N-term P => S missense 8.703e-06 1 114908 0 0.47 0.001


Residue

Diagrams

ICL1 K Q L H ICL1ECL1 C W Y F ECL1ICL2 P L R Y K A K M ICL2ECL2 L N F K G A E E I Y Y K H V H C R G G C S V F F ECL2ICL3 I G L E M K ICL3ECL3 H Y I I ECL3N-term M M P F C H N I I N I S C V K N N W S N N-termC-term G K I F Q K D S S R C K L F L E L S S C-term D V R A S L Y S L M V L I I L T T L V G N L I V I V S I S H F T P T N W L I H S M A T V D F L L G C L V M P Y S M V R S A E H G E V F C K I H T S T D I M L S S A S I F H L S F I S I D R Y Y A V C D N I L V I C V M I F I S W S V P A V F A F G M I F L E S K I S G V L T F M T S F Y I P G S I M L C V Y Y R I Y L I A K E Q A R L I S D A N Q K L Q N G I S Q S K E R K A V K T L G I V M G V F L I C W C P F F I C T V M D P F L P P T L N D V L I W F G Y L N S T F N P M V Y A F F Y P W L K M F R K A M L F
SnakePlot Download: PNG | SVG L N G V L T T L I I L V M L S Y L S A R 1 H S M A T V D F L L G L C V M P Y S M V R 2 F S L H F I S A S S L M I D T S T H I K 3 I C V M I F I S W S V P A V F A F G M I 4 Y V C L M I S G P I Y F S T M F T L V G S 5 G I V M G V F L I C W C P F F I C T V M 6 M P N F T S N L Y G F W I L V D N L T 7
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Versions

Package Name Version
Django 2.2.1
Python 3.6.7
debug_toolbar Debug Toolbar 1.11
polymorphic Polymorphic 2.0.3
rest_framework Django REST framework 3.9.3
rest_framework_swagger Rest_Framework_Swagger 2.2.0

Time

Resource usage

Resource Value
User CPU time 3120.248 msec
System CPU time 23.948 msec
Total CPU time 3144.196 msec
Elapsed time 3386.151 msec
Context switches 54 voluntary, 12 involuntary

Browser timing

Timing attribute Timeline Milliseconds since navigation start (+length)

Settings from protwis.settings

Setting Value
ABSOLUTE_URL_OVERRIDES {}
ADMINS []
ALLOWED_HOSTS ['*']
APPEND_SLASH True
AUTHENTICATION_BACKENDS ['django.contrib.auth.backends.ModelBackend']
AUTH_PASSWORD_VALIDATORS '********************'
AUTH_USER_MODEL 'auth.User'
BASE_DIR '/home/protwis/gpcrdb_test'
BUILD_CACHE_DIR '/home/protwis/gpcrdb_data/cache'
CACHES {'alignments': {'BACKEND': 'django.core.cache.backends.filebased.FileBasedCache', 'LOCATION': '/home/protwis/caches/test_alignment', 'OPTIONS': {'MAX_ENTRIES': 1000}}, 'default': {'BACKEND': 'django.core.cache.backends.filebased.FileBasedCache', 'LOCATION': '/home/protwis/caches/test/', 'OPTIONS': {'MAX_ENTRIES': 10000000}}}
CACHE_MIDDLEWARE_ALIAS 'default'
CACHE_MIDDLEWARE_KEY_PREFIX '********************'
CACHE_MIDDLEWARE_SECONDS 600
CSRF_COOKIE_AGE 31449600
CSRF_COOKIE_DOMAIN None
CSRF_COOKIE_HTTPONLY False
CSRF_COOKIE_NAME 'csrftoken'
CSRF_COOKIE_PATH '/'
CSRF_COOKIE_SAMESITE 'Lax'
CSRF_COOKIE_SECURE False
CSRF_FAILURE_VIEW 'django.views.csrf.csrf_failure'
CSRF_HEADER_NAME 'HTTP_X_CSRFTOKEN'
CSRF_TRUSTED_ORIGINS []
CSRF_USE_SESSIONS False
DATABASES {'default': {'ATOMIC_REQUESTS': False, 'AUTOCOMMIT': True, 'CONN_MAX_AGE': 0, 'ENGINE': 'django.db.backends.postgresql_psycopg2', 'HOST': 'localhost', 'NAME': 'protwis_202107', 'OPTIONS': {}, 'PASSWORD': '********************', 'PORT': '', 'TEST': {'CHARSET': None, 'COLLATION': None, 'MIRROR': None, 'NAME': None}, 'TIME_ZONE': None, 'USER': 'protwis'}}
DATABASE_ROUTERS []
DATA_DIR '/home/protwis/gpcrdb_data'
DATA_UPLOAD_MAX_MEMORY_SIZE 2621440
DATA_UPLOAD_MAX_NUMBER_FIELDS 1000
DATETIME_FORMAT 'N j, Y, P'
DATETIME_INPUT_FORMATS ['%Y-%m-%d %H:%M:%S', '%Y-%m-%d %H:%M:%S.%f', '%Y-%m-%d %H:%M', '%Y-%m-%d', '%m/%d/%Y %H:%M:%S', '%m/%d/%Y %H:%M:%S.%f', '%m/%d/%Y %H:%M', '%m/%d/%Y', '%m/%d/%y %H:%M:%S', '%m/%d/%y %H:%M:%S.%f', '%m/%d/%y %H:%M', '%m/%d/%y']
DATE_FORMAT 'N j, Y'
DATE_INPUT_FORMATS ['%Y-%m-%d', '%m/%d/%Y', '%m/%d/%y', '%b %d %Y', '%b %d, %Y', '%d %b %Y', '%d %b, %Y', '%B %d %Y', '%B %d, %Y', '%d %B %Y', '%d %B, %Y']
DEBUG True
DEBUG_PROPAGATE_EXCEPTIONS False
DEBUG_TOOLBAR_PATCH_SETTINGS False
DECIMAL_SEPARATOR '.'
DEFAULT_CHARSET 'utf-8'
DEFAULT_CONTENT_TYPE 'text/html'
DEFAULT_EXCEPTION_REPORTER_FILTER 'django.views.debug.SafeExceptionReporterFilter'
DEFAULT_FILE_STORAGE 'django.core.files.storage.FileSystemStorage'
DEFAULT_FROM_EMAIL 'webmaster@localhost'
DEFAULT_INDEX_TABLESPACE ''
DEFAULT_NUMBERING_SCHEME 'gpcrdb'
DEFAULT_PROTEIN_STATE 'inactive'
DEFAULT_SITE 'gpcr'
DEFAULT_TABLESPACE ''
DISALLOWED_USER_AGENTS []
DOCUMENTATION_URL 'https://docs.gpcrdb.org/'
EMAIL_BACKEND 'django.core.mail.backends.smtp.EmailBackend'
EMAIL_HOST 'localhost'
EMAIL_HOST_PASSWORD '********************'
EMAIL_HOST_USER ''
EMAIL_PORT 25
EMAIL_SSL_CERTFILE None
EMAIL_SSL_KEYFILE '********************'
EMAIL_SUBJECT_PREFIX '[Django] '
EMAIL_TIMEOUT None
EMAIL_USE_LOCALTIME False
EMAIL_USE_SSL False
EMAIL_USE_TLS False
FILE_CHARSET 'utf-8'
FILE_UPLOAD_DIRECTORY_PERMISSIONS None
FILE_UPLOAD_HANDLERS ['django.core.files.uploadhandler.MemoryFileUploadHandler', 'django.core.files.uploadhandler.TemporaryFileUploadHandler']
FILE_UPLOAD_MAX_MEMORY_SIZE 2621440
FILE_UPLOAD_PERMISSIONS None
FILE_UPLOAD_TEMP_DIR None
FIRST_DAY_OF_WEEK 0
FIXTURE_DIRS []
FORCE_SCRIPT_NAME None
FORMAT_MODULE_PATH None
FORM_RENDERER 'django.forms.renderers.DjangoTemplates'
GOOGLE_ANALYTICS_API '********************'
GOOGLE_ANALYTICS_KEY '********************'
IGNORABLE_404_URLS []
INSTALLED_APPS ('django.contrib.admin', 'django.contrib.auth', 'django.contrib.contenttypes', 'django.contrib.sessions', 'django.contrib.messages', 'django.contrib.staticfiles', 'django.contrib.humanize', 'debug_toolbar', 'rest_framework', 'rest_framework_swagger', 'polymorphic', 'common', 'api', 'news', 'pages', 'home', 'protein', 'family', 'residue', 'alignment', 'similaritysearch', 'similaritymatrix', 'structure', 'ligand', 'interaction', 'mutation', 'phylogenetic_trees', 'sitesearch', 'build_gpcr', 'construct', 'tools', 'drugs', 'signprot', 'signprot2', 'mutational_landscape', 'contactnetwork', 'seqsign', 'angles', 'hotspots')
INTERNAL_IPS '10.0.2.2'
LANGUAGES [('af', 'Afrikaans'), ('ar', 'Arabic'), ('ast', 'Asturian'), ('az', 'Azerbaijani'), ('bg', 'Bulgarian'), ('be', 'Belarusian'), ('bn', 'Bengali'), ('br', 'Breton'), ('bs', 'Bosnian'), ('ca', 'Catalan'), ('cs', 'Czech'), ('cy', 'Welsh'), ('da', 'Danish'), ('de', 'German'), ('dsb', 'Lower Sorbian'), ('el', 'Greek'), ('en', 'English'), ('en-au', 'Australian English'), ('en-gb', 'British English'), ('eo', 'Esperanto'), ('es', 'Spanish'), ('es-ar', 'Argentinian Spanish'), ('es-co', 'Colombian Spanish'), ('es-mx', 'Mexican Spanish'), ('es-ni', 'Nicaraguan Spanish'), ('es-ve', 'Venezuelan Spanish'), ('et', 'Estonian'), ('eu', 'Basque'), ('fa', 'Persian'), ('fi', 'Finnish'), ('fr', 'French'), ('fy', 'Frisian'), ('ga', 'Irish'), ('gd', 'Scottish Gaelic'), ('gl', 'Galician'), ('he', 'Hebrew'), ('hi', 'Hindi'), ('hr', 'Croatian'), ('hsb', 'Upper Sorbian'), ('hu', 'Hungarian'), ('hy', 'Armenian'), ('ia', 'Interlingua'), ('id', 'Indonesian'), ('io', 'Ido'), ('is', 'Icelandic'), ('it', 'Italian'), ('ja', 'Japanese'), ('ka', 'Georgian'), ('kab', 'Kabyle'), ('kk', 'Kazakh'), ('km', 'Khmer'), ('kn', 'Kannada'), ('ko', 'Korean'), ('lb', 'Luxembourgish'), ('lt', 'Lithuanian'), ('lv', 'Latvian'), ('mk', 'Macedonian'), ('ml', 'Malayalam'), ('mn', 'Mongolian'), ('mr', 'Marathi'), ('my', 'Burmese'), ('nb', 'Norwegian Bokmål'), ('ne', 'Nepali'), ('nl', 'Dutch'), ('nn', 'Norwegian Nynorsk'), ('os', 'Ossetic'), ('pa', 'Punjabi'), ('pl', 'Polish'), ('pt', 'Portuguese'), ('pt-br', 'Brazilian Portuguese'), ('ro', 'Romanian'), ('ru', 'Russian'), ('sk', 'Slovak'), ('sl', 'Slovenian'), ('sq', 'Albanian'), ('sr', 'Serbian'), ('sr-latn', 'Serbian Latin'), ('sv', 'Swedish'), ('sw', 'Swahili'), ('ta', 'Tamil'), ('te', 'Telugu'), ('th', 'Thai'), ('tr', 'Turkish'), ('tt', 'Tatar'), ('udm', 'Udmurt'), ('uk', 'Ukrainian'), ('ur', 'Urdu'), ('vi', 'Vietnamese'), ('zh-hans', 'Simplified Chinese'), ('zh-hant', 'Traditional Chinese')]
LANGUAGES_BIDI ['he', 'ar', 'fa', 'ur']
LANGUAGE_CODE 'en-us'
LANGUAGE_COOKIE_AGE None
LANGUAGE_COOKIE_DOMAIN None
LANGUAGE_COOKIE_NAME 'django_language'
LANGUAGE_COOKIE_PATH '/'
LOCALE_PATHS []
LOGGING {'disable_existing_loggers': False, 'formatters': {'verbose': {'datefmt': '%d/%b/%Y %H:%M:%S', 'format': '[%(asctime)s] %(levelname)s ' '[%(name)s:%(lineno)s] %(message)s'}, 'verbose_low': {'datefmt': '%d/%b/%Y %H:%M:%S', 'format': '[%(asctime)s] %(levelname)s ' '[%(name)s:%(lineno)s]'}}, 'handlers': {'build': {'class': 'logging.FileHandler', 'filename': 'logs/build.log', 'formatter': 'verbose', 'level': 'DEBUG'}, 'django': {'class': 'logging.FileHandler', 'filename': 'logs/django.log', 'formatter': 'verbose', 'level': 'WARNING'}, 'protwis': {'class': 'logging.FileHandler', 'filename': 'logs/protwis.log', 'formatter': 'verbose', 'level': 'DEBUG'}}, 'loggers': {'build': {'handlers': ['build'], 'level': 'DEBUG'}, 'django': {'handlers': ['django'], 'level': 'WARNING', 'propagate': True}, 'protwis': {'handlers': ['protwis'], 'level': 'DEBUG'}}, 'version': 1}
LOGGING_CONFIG 'logging.config.dictConfig'
LOGIN_REDIRECT_URL '/accounts/profile/'
LOGIN_URL '/accounts/login/'
LOGOUT_REDIRECT_URL None
MANAGERS []
MEDIA_ROOT '/protwis/media/protwis'
MEDIA_URL '/media/'
MESSAGE_STORAGE 'django.contrib.messages.storage.fallback.FallbackStorage'
MIDDLEWARE ('common.middleware.stats.StatsMiddleware', 'debug_toolbar.middleware.DebugToolbarMiddleware', 'django.contrib.sessions.middleware.SessionMiddleware', 'django.middleware.common.CommonMiddleware', 'django.middleware.csrf.CsrfViewMiddleware', 'django.contrib.auth.middleware.AuthenticationMiddleware', 'django.contrib.messages.middleware.MessageMiddleware', 'django.middleware.clickjacking.XFrameOptionsMiddleware')
MIGRATION_MODULES {}
MONTH_DAY_FORMAT 'F j'
NUMBER_GROUPING 0
PASSWORD_HASHERS '********************'
PASSWORD_RESET_TIMEOUT_DAYS '********************'
PREPEND_WWW False
REFERENCE_POSITIONS {'D1S1': 'D1S1x50', 'D1S2': 'D1S2x50', 'D1T1': 'D1T1x50', 'D1e1': 'D1e1x50', 'ECL1': '23x50', 'ECL2': '45x50', 'H8': '8x50', 'ICL1': '12x50', 'ICL2': '34x50', 'TM1': '1x50', 'TM2': '2x50', 'TM3': '3x50', 'TM4': '4x50', 'TM5': '5x50', 'TM6': '6x50', 'TM7': '7x50'}
ROOT_URLCONF 'protwis.urls'
SECRET_KEY '********************'
SECURE_BROWSER_XSS_FILTER False
SECURE_CONTENT_TYPE_NOSNIFF False
SECURE_HSTS_INCLUDE_SUBDOMAINS False
SECURE_HSTS_PRELOAD False
SECURE_HSTS_SECONDS 0
SECURE_PROXY_SSL_HEADER None
SECURE_REDIRECT_EXEMPT []
SECURE_SSL_HOST None
SECURE_SSL_REDIRECT False
SERVER_EMAIL 'root@localhost'
SESSION_CACHE_ALIAS 'default'
SESSION_COOKIE_AGE 86400
SESSION_COOKIE_DOMAIN None
SESSION_COOKIE_HTTPONLY True
SESSION_COOKIE_NAME 'sessionid'
SESSION_COOKIE_PATH '/'
SESSION_COOKIE_SAMESITE 'Lax'
SESSION_COOKIE_SECURE False
SESSION_ENGINE 'django.contrib.sessions.backends.db'
SESSION_EXPIRE_AT_BROWSER_CLOSE False
SESSION_FILE_PATH None
SESSION_SAVE_EVERY_REQUEST False
SESSION_SERIALIZER 'django.contrib.sessions.serializers.PickleSerializer'
SETTINGS_MODULE 'protwis.settings'
SHORT_DATETIME_FORMAT 'm/d/Y P'
SHORT_DATE_FORMAT 'm/d/Y'
SIGNING_BACKEND 'django.core.signing.TimestampSigner'
SILENCED_SYSTEM_CHECKS []
SITE_NAME 'gpcr'
SITE_TITLE 'GPCRdb'
STATICFILES_DIRS ('/home/protwis/gpcrdb_test/static',)
STATICFILES_FINDERS ['django.contrib.staticfiles.finders.FileSystemFinder', 'django.contrib.staticfiles.finders.AppDirectoriesFinder']
STATICFILES_STORAGE 'django.contrib.staticfiles.storage.StaticFilesStorage'
STATIC_ROOT '/home/protwis/static_test/'
STATIC_URL '/static/'
SWAGGER_SETTINGS {'USE_SESSION_AUTH': False}
TEMPLATES [{'APP_DIRS': True, 'BACKEND': 'django.template.backends.django.DjangoTemplates', 'DIRS': [], 'OPTIONS': {'context_processors': ['django.contrib.auth.context_processors.auth', 'django.template.context_processors.debug', 'django.template.context_processors.i18n', 'django.template.context_processors.media', 'django.template.context_processors.static', 'django.template.context_processors.tz', 'django.contrib.messages.context_processors.messages', 'protwis.context_processors.current_site', 'protwis.context_processors.canonical_tag', 'protwis.context_processors.documentation_url', 'protwis.context_processors.google_analytics', 'protwis.context_processors.site_title'], 'debug': True}}]
TEST_NON_SERIALIZED_APPS []
TEST_RUNNER 'django.test.runner.DiscoverRunner'
THOUSAND_SEPARATOR ','
TIME_FORMAT 'P'
TIME_INPUT_FORMATS ['%H:%M:%S', '%H:%M:%S.%f', '%H:%M']
TIME_ZONE 'Europe/Copenhagen'
USE_I18N True
USE_L10N True
USE_THOUSAND_SEPARATOR False
USE_TZ True
USE_X_FORWARDED_HOST False
USE_X_FORWARDED_PORT False
WSGI_APPLICATION None
X_FRAME_OPTIONS 'SAMEORIGIN'
YEAR_MONTH_FORMAT 'F Y'

Headers

Request headers

Key Value
Accept text/html,application/xhtml+xml,application/xml;q=0.9,*/*;q=0.8
Accept-Encoding br,gzip
Accept-Language en-US,en;q=0.5
Connection close
Host test.gpcrdb.org
User-Agent CCBot/2.0 (https://commoncrawl.org/faq/)
X-Forwarded-For 3.236.207.90
X-Forwarded-Proto https
X-Real-Ip 3.236.207.90

Response headers

Key Value
Content-Length 498057
Content-Type text/html; charset=utf-8
Vary Cookie
X-Frame-Options SAMEORIGIN

WSGI environ

Since the WSGI environ inherits the environment of the server, only a significant subset is shown below.

Key Value
PATH_INFO /mutational_landscape/protein/TAAR1_human/
QUERY_STRING
REMOTE_ADDR
REQUEST_METHOD GET
SCRIPT_NAME
SERVER_NAME test.gpcrdb.org
SERVER_PORT 443
SERVER_PROTOCOL HTTP/1.0
SERVER_SOFTWARE gunicorn/19.9.0

Request

View information

View function Arguments Keyword arguments URL name
mutational_landscape.views.render_variants () {'protein': 'TAAR1_human'} render

No cookies

No session data

No GET data

No POST data

SQL queries from 1 connection

  •   default 240.05 ms (23 queries including 12 similar and 2 duplicates )
  Query Timeline Time (ms) Action
  +
SELECT ••• "protein"."id", "protein"."parent_id", "protein"."family_id", "protein"."species_id", "protein"."source_id", "protein"."residue_numbering_scheme_id", "protein"."sequence_type_id", "protein"."entry_name", "protein"."accession", "protein"."name", "protein"."sequence" FROM "protein" WHERE "protein"."entry_name" = 'taar1_human'
1.7030223755707115%
 4.09

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(89)
  proteins.append(Protein.objects.get(entry_name=protein.lower()))
  +
SELECT ••• "residue_position_set"."id", "residue_position_set"."name", "residue_position_set"."set_type", "residue_position_set"."protein_group" FROM "residue_position_set" WHERE "residue_position_set"."name" = 'State (micro-)switches'
  3 similar queries.
0.21363510409124634%
 0.51

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(128)
  micro_switches_rset = ResiduePositionSet.objects.get(name="State (micro-)switches")
  +
SELECT ••• "residue_generic_number_equivalent"."id", "residue_generic_number_equivalent"."default_generic_number_id", "residue_generic_number_equivalent"."scheme_id", "residue_generic_number_equivalent"."label" FROM "residue_generic_number_equivalent" INNER JOIN "residue_position_set_residue_position" ON ("residue_generic_number_equivalent"."id" = "residue_position_set_residue_position"."residuegenericnumberequivalent_id") WHERE "residue_position_set_residue_position"."residuepositionset_id" = 2
  3 similar queries.
0.7254257555938927%
 1.74

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(130)
  for residue in micro_switches_rset.residue_position.all():
  +
SELECT ••• "residue"."id", "residue"."protein_conformation_id", "residue"."protein_segment_id", "residue"."generic_number_id", "residue"."display_generic_number_id", "residue"."sequence_number", "residue"."amino_acid" FROM "residue" INNER JOIN "residue_generic_number" ON ("residue"."generic_number_id" = "residue_generic_number"."id") INNER JOIN "protein_conformation" ON ("residue"."protein_conformation_id" = "protein_conformation"."id") WHERE ("residue_generic_number"."label" IN ('5x47', '5x50', '6x30', '6x44', '6x50', '6x48', '6x34', '5x58', '3x40', '3x49', '3x50', '7x53', '7x50', '7x49', '7x43') AND "protein_conformation"."protein_id" = 36) ORDER BY "residue"."sequence_number" ASC
  2 similar queries.   Duplicated 2 times.
2.748453851937266%
 6.60

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(135)
  for ms in ms_object:
  +
SELECT ••• "residue_position_set"."id", "residue_position_set"."name", "residue_position_set"."set_type", "residue_position_set"."protein_group" FROM "residue_position_set" WHERE "residue_position_set"."name" = 'Sodium ion pocket'
  3 similar queries.
0.12534053991778377%
 0.30

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(139)
  sodium_pocket_rset = ResiduePositionSet.objects.get(name="Sodium ion pocket")
  +
SELECT ••• "residue_generic_number_equivalent"."id", "residue_generic_number_equivalent"."default_generic_number_id", "residue_generic_number_equivalent"."scheme_id", "residue_generic_number_equivalent"."label" FROM "residue_generic_number_equivalent" INNER JOIN "residue_position_set_residue_position" ON ("residue_generic_number_equivalent"."id" = "residue_position_set_residue_position"."residuegenericnumberequivalent_id") WHERE "residue_position_set_residue_position"."residuepositionset_id" = 3
  3 similar queries.
0.4176362681095727%
 1.00

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(141)
  for residue in sodium_pocket_rset.residue_position.all():
  +
SELECT ••• "residue"."id", "residue"."protein_conformation_id", "residue"."protein_segment_id", "residue"."generic_number_id", "residue"."display_generic_number_id", "residue"."sequence_number", "residue"."amino_acid" FROM "residue" INNER JOIN "residue_generic_number" ON ("residue"."generic_number_id" = "residue_generic_number"."id") INNER JOIN "protein_conformation" ON ("residue"."protein_conformation_id" = "protein_conformation"."id") WHERE ("residue_generic_number"."label" IN ('5x47', '5x50', '6x30', '6x44', '6x50', '6x48', '6x34', '5x58', '3x40', '3x49', '3x50', '7x53', '7x50', '7x49', '7x43') AND "protein_conformation"."protein_id" = 36) ORDER BY "residue"."sequence_number" ASC
  2 similar queries.   Duplicated 2 times.
0.4991771423350088%
 1.20

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(146)
  for sp in sp_object:
  +
SELECT ••• "residue_ptm"."id", "residue_ptm"."protein_id", "residue_ptm"."residue_id", "residue_ptm"."modification" FROM "residue_ptm" WHERE "residue_ptm"."protein_id" IN (36)
0.22227585446592713%
 0.53

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(149)
  for ptm in ptms:
  +
SELECT ••• "residue"."id", "residue"."protein_conformation_id", "residue"."protein_segment_id", "residue"."generic_number_id", "residue"."display_generic_number_id", "residue"."sequence_number", "residue"."amino_acid" FROM "residue" WHERE "residue"."id" IN (15032, 14777, 14844) ORDER BY "residue"."sequence_number" ASC
1.2320518206656952%
 2.96

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(149)
  for ptm in ptms:
  +
SELECT ••• "residue_position_set"."id", "residue_position_set"."name", "residue_position_set"."set_type", "residue_position_set"."protein_group" FROM "residue_position_set" WHERE "residue_position_set"."name" = 'G-protein interface'
  3 similar queries.
0.12236097082306624%
 0.29

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(154)
  rset = ResiduePositionSet.objects.get(name='G-protein interface')
  +
SELECT ••• "residue_generic_number_equivalent"."id", "residue_generic_number_equivalent"."default_generic_number_id", "residue_generic_number_equivalent"."scheme_id", "residue_generic_number_equivalent"."label" FROM "residue_generic_number_equivalent" INNER JOIN "residue_position_set_residue_position" ON ("residue_generic_number_equivalent"."id" = "residue_position_set_residue_position"."residuegenericnumberequivalent_id") WHERE "residue_position_set_residue_position"."residuepositionset_id" = 1
  3 similar queries.
0.43720210516488445%
 1.05

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(156)
  for residue in rset.residue_position.all():
  +
SELECT ••• "protein_family"."id", "protein_family"."parent_id", "protein_family"."slug", "protein_family"."name" FROM "protein_family" WHERE "protein_family"."id" = 46
0.21492625069895727%
 0.52

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(163)
  orthologs = Protein.objects.filter(family__slug=proteins[0].family.slug, sequence_type__slug='wt')
  +
SELECT ••• "interaction_residue_fragment"."id", "interaction_residue_fragment"."structure_ligand_pair_id", "interaction_residue_fragment"."rotamer_id", "interaction_residue_fragment"."fragment_id", "interaction_residue_fragment"."interaction_type_id" FROM "interaction_residue_fragment" INNER JOIN "interaction_structure_ligand" ON ("interaction_residue_fragment"."structure_ligand_pair_id" = "interaction_structure_ligand"."id") INNER JOIN "structure" ON ("interaction_structure_ligand"."structure_id" = "structure"."id") INNER JOIN "protein_conformation" ON ("structure"."protein_conformation_id" = "protein_conformation"."id") INNER JOIN "protein" ON ("protein_conformation"."protein_id" = "protein"."id") INNER JOIN "interaction_type_residue_fragment" ON ("interaction_residue_fragment"."interaction_type_id" = "interaction_type_residue_fragment"."id") WHERE ("interaction_structure_ligand"."annotated" = true AND "protein"."parent_id" IN (SELECT ••• U0."id" FROM "protein" U0 INNER JOIN "protein_family" U1 ON (U0."family_id" = U1."id") INNER JOIN "protein_sequence_type" U2 ON (U0."sequence_type_id" = U2."id") WHERE (U1."slug" = '001_001_006_001' AND U2."slug" = 'wt')) AND NOT ("interaction_type_residue_fragment"."type" = 'hidden' AND "interaction_type_residue_fragment"."type" IS NOT NULL))
85.66956380101644%
 205.65

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(170)
  for interaction in interactions:
  +
SELECT ••• "mutation_natural"."id", "mutation_natural"."protein_id", "mutation_natural"."residue_id", "mutation_natural"."amino_acid", "mutation_natural"."type", "mutation_natural"."allele_frequency", "mutation_natural"."allele_count", "mutation_natural"."allele_number", "mutation_natural"."number_homozygotes", "mutation_natural"."sift_score", "mutation_natural"."polyphen_score" FROM "mutation_natural" WHERE "mutation_natural"."protein_id" IN (36)
1.6387630020946369%
 3.93

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(190)
  for NM in NMs:
  +
SELECT ••• "residue"."id", "residue"."protein_conformation_id", "residue"."protein_segment_id", "residue"."generic_number_id", "residue"."display_generic_number_id", "residue"."sequence_number", "residue"."amino_acid" FROM "residue" WHERE "residue"."id" IN (14861, 14862, 14864, 14868, 14869, 14872, 14877, 14878, 14879, 14880, 14881, 14882, 14883, 14884, 14891, 14892, 14897, 14900, 14905, 14907, 14908, 14920, 14922, 14927, 14928, 14930, 14932, 14937, 14939, 14944, 14947, 14948, 14954, 14955, 14956, 14957, 14959, 14962, 14963, 14965, 14968, 14973, 14974, 14976, 14979, 14982, 14983, 14985, 14986, 14990, 14993, 14997, 15001, 15003, 15008, 15009, 15010, 15012, 15025, 15028, 15030, 15034, 15035, 15037, 15040, 15049, 14713, 14719, 14723, 14726, 14728, 14730, 14733, 14734, 14736, 14738, 14746, 14748, 14749, 14750, 14751, 14752, 14755, 14757, 14758, 14759, 14760, 14761, 14763, 14765, 14768, 14769, 14771, 14773, 14774, 14775, 14779, 14782, 14784, 14787, 14788, 14790, 14804, 14808, 14809, 14810, 14813, 14814, 14819, 14823, 14825, 14827, 14829, 14831, 14833, 14839, 14844, 14845) ORDER BY "residue"."sequence_number" ASC
0.5100029100458158%
 1.22

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(190)
  for NM in NMs:
  +
SELECT ••• "residue_generic_number"."id", "residue_generic_number"."scheme_id", "residue_generic_number"."protein_segment_id", "residue_generic_number"."label" FROM "residue_generic_number" WHERE "residue_generic_number"."id" IN (88576, 30722, 2, 4, 7, 15, 17, 18, 27, 10270, 32802, 40994, 55347, 57400, 5694, 22078, 28226, 89174, 63576, 98, 30306, 36962, 72295, 73322, 86651, 78461, 9854, 76414, 11390, 15998, 92800, 75396, 87176, 74380, 70290, 67736, 5278, 34466, 85164, 89785, 11966, 13502, 19646, 70852, 71900, 9438, 15582, 81632, 38626, 42722, 8190, 78102, 6942, 13086, 21278, 36130, 50466, 82746, 52027, 9022, 15166, 88894, 54087, NULL, 80210, 71509, 66904, 83810, 58232, 20862, 6526, 94078, 29058, 81293, 64408, 410, 929, 37794, 53165, 93615, 66488, 51642, 10686, 82370, 42434, 53191, 74704, 26584, 68568, 72668, 6110, 49633, 28642, 35298, 14334)
  2 similar queries.
0.4363082344364691%
 1.05

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(190)
  for NM in NMs:
  +
SELECT ••• "residue_generic_number"."id", "residue_generic_number"."scheme_id", "residue_generic_number"."protein_segment_id", "residue_generic_number"."label" FROM "residue_generic_number" WHERE "residue_generic_number"."id" IN (49665, 28674, 35330, 88601, 8222, 14366, 32, 30754, 572, 10302, 32834, 41026, 55379, 57432, 5726, 22110, 49249, 28258, 89186, 118, 63608, 30338, 36994, 72323, 73356, 86668, 87193, 78491, 92829, 9886, 11422, 16030, 76446, 75426, 74409, 70315, 52403, 67768, 5310, 34498, 85196, 70866, 89816, 11998, 13534, 19678, 17662, 15614, 81664, 9470, 38658, 42755, 71935, 58648, 53534, 1312, 79141, 78131, 52026, 6974, 13118, 21310, 36162, 50498, NULL, 88916, 82778, 9054, 15198, 80234, 54127, 66936, 71545, 4478, 83841, 58264, 94104, 81307, 6558, 20894, 29090, 64440, 18878, 93630, 37826, 66520, 10718, 26594, 42467, 82402, 74732, 53239, 68600, 72701, 6142)
  2 similar queries.
0.3937997153518325%
 0.95

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(190)
  for NM in NMs:
  +
SELECT ••• "protein_segment"."id", "protein_segment"."slug", "protein_segment"."name", "protein_segment"."category", "protein_segment"."fully_aligned", "protein_segment"."partial", "protein_segment"."proteinfamily" FROM "protein_segment" WHERE "protein_segment"."id" IN (1, 5, 6, 7, 10, 11, 12, 13, 14, 15, 16, 17, 18, 20, 21) ORDER BY "protein_segment"."id" ASC
0.32973897981540573%
 0.79

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(190)
  for NM in NMs:
  +
SELECT ••• "protein"."id", "protein"."parent_id", "protein"."family_id", "protein"."species_id", "protein"."source_id", "protein"."residue_numbering_scheme_id", "protein"."sequence_type_id", "protein"."entry_name", "protein"."accession", "protein"."name", "protein"."sequence" FROM "protein" WHERE "protein"."id" IN (36)
0.1626844725715767%
 0.39

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(190)
  for NM in NMs:
  +
SELECT ••• "residue"."id", "residue"."protein_conformation_id", "residue"."protein_segment_id", "residue"."generic_number_id", "residue"."display_generic_number_id", "residue"."sequence_number", "residue"."amino_acid" FROM "residue" INNER JOIN "protein_conformation" ON ("residue"."protein_conformation_id" = "protein_conformation"."id") WHERE "protein_conformation"."protein_id" = 36 ORDER BY "residue"."sequence_number" ASC
0.45517883870301346%
 1.09

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(237)
  for r in residuelist:
  +
SELECT ••• "protein_segment"."id", "protein_segment"."slug", "protein_segment"."name", "protein_segment"."category", "protein_segment"."fully_aligned", "protein_segment"."partial", "protein_segment"."proteinfamily" FROM "protein_segment" WHERE "protein_segment"."id" IN (1, 5, 6, 7, 8, 10, 11, 12, 13, 14, 15, 16, 17, 18, 20, 21) ORDER BY "protein_segment"."id" ASC
0.18681898223878862%
 0.45

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(237)
  for r in residuelist:
  +
SELECT ••• "residue_generic_number"."id", "residue_generic_number"."scheme_id", "residue_generic_number"."protein_segment_id", "residue_generic_number"."label" FROM "residue_generic_number" WHERE "residue_generic_number"."id" IN (47617, 28674, 35330, 49665, 71172, 88068, 90119, 90635, 64024, 25625, 88601, 24606, 8222, 32, 2080, 14366, 30754, 37410, 43043, 79903, 85541, 93630, 83498, 52781, 84575, 91181, 66104, 68600, 572, 10302, 16446, 18494, 45121, 32834, 39490, 41026, 51265, 71757, 55379, 80979, 77399, 26200, 57432, 59480, 61528, 68184, 22110, 20062, 3678, 5726, 28258, 34914, 47201, 49249, 53859, 70752, 82022, 89186, 118, 4094, 20478, 26230, 63608, 69245, 13950, 7806, 24190, 30338, 36994, 41602, 72323, 138, 73356, 86668, 65688, 79512, 87193, 78491, 92829, 16030, 9886, 1696, 18078, 11422, 32418, 39074, 44705, 75426, 76446, 74409, 70315, 52403, 92339, 54965, 22526, 93876, 57016, 59064, 61112, 67768, 5310, 3262, 21694, 46785, 27842, 34498, 42178, 50882, 85196, 93390, 80591, 70866, 63192, 89816, 90330, 71387, 19678, 23774, 224, 7390, 29922, 11998, 13534, 36578, 48865, 84193, 91871, 83178, 246, 65272, 90874, 9470, 17662, 15614, 44289, 32002, 38658, 42755, 70910, 71935, 81664, 86285, 54546, 87826, 88343, 25368, 56600, 58648, 60696, 67352, 74011, 4894, 2847, 1312, 46369, 27426, 34082, 40738, 53534, 77091, 79141, 59896, 53553, 78131, 25912, 62776, 52026, 74041, 19262, 23358, 6974, 13118, 21310, 29506, 36162, 48449, 50498, 70469, 69960, 75076, 91462, NULL, 88916, 64856, 82778, 9054, 15198, 43873, 31586, 38242, 41314, 73062, 61944, 80234, 54127, 89457, 12286, 56184, 60280, 66936, 71545, 86907, 71037, 17278, 11134, 4478, 45953, 27010, 33666, 40322, 68995, 83841, 92552, 76096, 58264, 62360, 94104, 81307, 6558, 12702, 928, 2464, 20894, 29090, 22942, 35746, 41890, 48033, 50081, 93099, 53164, 64440, 85944, 91578, 51645, 18878, 8638, 11710, 14782, 25022, 31170, 37826, 43459, 77766, 78791, 76744, 84933, 66520, 75738, 25051, 73692, 92123, 10718, 16862, 87519, 45537, 26594, 33250, 39906, 42467, 69603, 82402, 55785, 70633, 74732, 91126, 53239, 57848, 72701, 6142)
  2 similar queries.
0.786407603065778%
 1.89

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(237)
  for r in residuelist:
  +
SELECT ••• "residue_generic_number"."id", "residue_generic_number"."scheme_id", "residue_generic_number"."protein_segment_id", "residue_generic_number"."label" FROM "residue_generic_number" WHERE "residue_generic_number"."id" IN (88576, 30722, 37378, 43010, 2, 6, 7, 4, 79876, 85510, 83467, 9, 10, 11, 15, 16, 17, 18, 19, 20, 12, 13, 24, 66072, 27, 71707, 16414, 2079, 10270, 18462, 32802, 39458, 40994, 45089, 52780, 53806, 55347, 80949, 77366, 26168, 57400, 59448, 61496, 68152, 3646, 5694, 22078, 26174, 28226, 34882, 47169, 51266, 70718, 81989, 84547, 596, 89174, 63576, 24158, 7774, 13918, 69216, 30306, 98, 36962, 41570, 72295, 73322, 65656, 79480, 86651, 78461, 9854, 18046, 11390, 15998, 32386, 39042, 44673, 75396, 76414, 92800, 87176, 74380, 54927, 70290, 92307, 71316, 56984, 59032, 61080, 67736, 88056, 93849, 5278, 3230, 1695, 46753, 27810, 34466, 42146, 85164, 80559, 93361, 52404, 183, 63160, 89785, 187, 19646, 23742, 7358, 11966, 13502, 29890, 36546, 48833, 50881, 70852, 83146, 84171, 65240, 25307, 71900, 9438, 15582, 73952, 44257, 31970, 38626, 42722, 81632, 54507, 91838, 70898, 86259, 8190, 24574, 56568, 60664, 67320, 53500, 4862, 46337, 27394, 34050, 40706, 87809, 88322, 70419, 77076, 78102, 74007, 25880, 62744, 6942, 13086, 21278, 1313, 29474, 23326, 36130, 48417, 50466, 50465, 75046, 76072, 91437, 69937, 64824, 82746, 52027, 9022, 15166, 88894, 43841, 31554, 38210, 41282, 54087, 73034, NULL, 80210, 71509, 56152, 66904, 89432, 86875, 11102, 17246, 45921, 26978, 33634, 40290, 68964, 71011, 83810, 92526, 58232, 62328, 12670, 20862, 6526, 22910, 29058, 35714, 41858, 48001, 50049, 94078, 93066, 81293, 64408, 85912, 410, 11678, 2463, 8606, 929, 24990, 14750, 31138, 37794, 43426, 63992, 78761, 76714, 77739, 91563, 25005, 53165, 84911, 93615, 66488, 51642, 10686, 16830, 75712, 45505, 33218, 39874, 42434, 69573, 82370, 53191, 87493, 92098, 73674, 55758, 74704, 70613, 26584, 57816, 59864, 61912, 68568, 72668, 22494, 20446, 4062, 6110, 12254, 28642, 35298, 47585, 49633, 71138, 91122, 25592, 14334)
  2 similar queries.
0.7692254212862402%
 1.85

Connection: default

/usr/lib/python3.6/concurrent/futures/thread.py in _worker(69)
  work_item.run()
/usr/lib/python3.6/concurrent/futures/thread.py in run(56)
  result = self.fn(*self.args, **self.kwargs)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle(279)
  keepalive = self.handle_request(req, conn)
/home/protwis/gpcrdb_env/lib/python3.6/site-packages/gunicorn/workers/gthread.py in handle_request(328)
  respiter = self.wsgi(environ, resp.start_response)
/home/protwis/gpcrdb_test/common/middleware/stats.py in __call__(34)
  response = self.get_response(request)
/home/protwis/gpcrdb_test/mutational_landscape/views.py in render_variants(237)
  for r in residuelist:

Static files (590 found, 40 used)

Static file path

  1. /home/protwis/gpcrdb_test/static

Static file apps

  1. django.contrib.admin
  2. debug_toolbar
  3. rest_framework
  4. rest_framework_swagger
  5. polymorphic

Static files

bootstrap/css/bootstrap.min.css
/home/protwis/gpcrdb_test/static/bootstrap/css/bootstrap.min.css
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home/css/bootstrap-treeview.min.css
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flowplayer/flowplayer.css
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home/js/alignment.js
/home/protwis/gpcrdb_test/static/home/js/alignment.js
home/js/diagrams.js
/home/protwis/gpcrdb_test/static/home/js/diagrams.js
home/js/residuetable.js
/home/protwis/gpcrdb_test/static/home/js/residuetable.js

django.contrib.staticfiles.finders.FileSystemFinder (415 files)

Path Location
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django.contrib.staticfiles.finders.AppDirectoriesFinder (175 files)

Path Location
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debug_toolbar/css/print.css /home/protwis/gpcrdb_env/lib/python3.6/site-packages/debug_toolbar/static/debug_toolbar/css/print.css
debug_toolbar/css/toolbar.css /home/protwis/gpcrdb_env/lib/python3.6/site-packages/debug_toolbar/static/debug_toolbar/css/toolbar.css
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rest_framework/js/default.js /home/protwis/gpcrdb_env/lib/python3.6/site-packages/rest_framework/static/rest_framework/js/default.js
rest_framework/js/ajax-form.js /home/protwis/gpcrdb_env/lib/python3.6/site-packages/rest_framework/static/rest_framework/js/ajax-form.js
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Templates (9 rendered)

Template paths

None

Templates

browser.html
/home/protwis/gpcrdb_test/mutational_landscape/templates/browser.html
Toggle context {'False': False, 'None': None, 'True': True} {'DEFAULT_MESSAGE_LEVELS': {'DEBUG': 10, 'ERROR': 40, 'INFO': 20, 'SUCCESS': 25, 'WARNING': 30}, 'LANGUAGES': [('af', 'Afrikaans'), ('ar', 'Arabic'), ('ast', 'Asturian'), ('az', 'Azerbaijani'), ('bg', 'Bulgarian'), ('be', 'Belarusian'), ('bn', 'Bengali'), ('br', 'Breton'), ('bs', 'Bosnian'), ('ca', 'Catalan'), ('cs', 'Czech'), ('cy', 'Welsh'), ('da', 'Danish'), ('de', 'German'), ('dsb', 'Lower Sorbian'), ('el', 'Greek'), ('en', 'English'), ('en-au', 'Australian English'), ('en-gb', 'British English'), ('eo', 'Esperanto'), ('es', 'Spanish'), ('es-ar', 'Argentinian Spanish'), ('es-co', 'Colombian Spanish'), ('es-mx', 'Mexican Spanish'), ('es-ni', 'Nicaraguan Spanish'), ('es-ve', 'Venezuelan Spanish'), ('et', 'Estonian'), ('eu', 'Basque'), ('fa', 'Persian'), ('fi', 'Finnish'), ('fr', 'French'), ('fy', 'Frisian'), ('ga', 'Irish'), ('gd', 'Scottish Gaelic'), ('gl', 'Galician'), ('he', 'Hebrew'), ('hi', 'Hindi'), ('hr', 'Croatian'), ('hsb', 'Upper Sorbian'), ('hu', 'Hungarian'), ('hy', 'Armenian'), ('ia', 'Interlingua'), ('id', 'Indonesian'), ('io', 'Ido'), ('is', 'Icelandic'), ('it', 'Italian'), ('ja', 'Japanese'), ('ka', 'Georgian'), ('kab', 'Kabyle'), ('kk', 'Kazakh'), ('km', 'Khmer'), ('kn', 'Kannada'), ('ko', 'Korean'), ('lb', 'Luxembourgish'), ('lt', 'Lithuanian'), ('lv', 'Latvian'), ('mk', 'Macedonian'), ('ml', 'Malayalam'), ('mn', 'Mongolian'), ('mr', 'Marathi'), ('my', 'Burmese'), ('nb', 'Norwegian Bokmål'), ('ne', 'Nepali'), ('nl', 'Dutch'), ('nn', 'Norwegian Nynorsk'), ('os', 'Ossetic'), ('pa', 'Punjabi'), ('pl', 'Polish'), ('pt', 'Portuguese'), ('pt-br', 'Brazilian Portuguese'), ('ro', 'Romanian'), ('ru', 'Russian'), ('sk', 'Slovak'), ('sl', 'Slovenian'), ('sq', 'Albanian'), ('sr', 'Serbian'), ('sr-latn', 'Serbian Latin'), ('sv', 'Swedish'), ('sw', 'Swahili'), ('ta', 'Tamil'), ('te', 'Telugu'), ('th', 'Thai'), ('tr', 'Turkish'), ('tt', 'Tatar'), ('udm', 'Udmurt'), ('uk', 'Ukrainian'), ('ur', 'Urdu'), ('vi', 'Vietnamese'), ('zh-hans', 'Simplified Chinese'), ('zh-hant', 'Traditional Chinese')], 'LANGUAGE_BIDI': False, 'LANGUAGE_CODE': 'en-us', 'MEDIA_URL': '/media/', 'STATIC_URL': '/static/', 'TIME_ZONE': 'Europe/Copenhagen', 'canonical_tag': 'https://gpcrdb.org/mutational_landscape/protein/TAAR1_human/', 'csrf_token': <SimpleLazyObject: 'h9UkF2dBr426ylGPymYQ01G92YxEkSwtPsZlh1cFdXIpsz3oBcKl8GxO2lEqEAXm'>, 'current_site': 'gpcr', 'debug': True, 'documentation_url': 'https://docs.gpcrdb.org/', 'messages': <django.contrib.messages.storage.fallback.FallbackStorage object at 0x7f2e39b28400>, 'perms': <django.contrib.auth.context_processors.PermWrapper object at 0x7f2e711c8630>, 'site_title': 'GPCRdb', 'sql_queries': <function debug.<locals>.<lambda> at 0x7f2e3997a0d0>, 'user': <SimpleLazyObject: <django.contrib.auth.models.AnonymousUser object at 0x7f2e711c82e8>>} {'HelixBox': <common.diagrams_gpcr.DrawHelixBox object at 0x7f2e8020ac18>, 'SnakePlot': <common.diagrams_gpcr.DrawSnakePlot object at 0x7f2e8020a940>, 'mutations': '<<queryset of mutational_landscape.NaturalMutations>>', 'mutations_pos_list': '{"339": ["Ter", 1.744e-05, 1, 57342, 0, "stop gained", ' '"deleterious", "#575c9d", ""], "324": ["SerfsTer14", ' '9.236e-06, 1, 108270, 0, "frameshift", "deleterious", ' '"#575c9d", ""], "320": ["LeufsTer18", 3.523e-05, 4, ' '113552, 0, "frameshift", "deleterious", "#575c9d", ' '""], "291": ["Ter", 0.0001408, 17, 120742, 0, "stop ' 'gained", "deleterious", "#575c9d", ""], "258": ["Ter", ' '8.265e-06, 1, 120998, 0, "stop gained", "deleterious", ' '"#575c9d", ""], "246": ["GlyfsTer4", 1.653e-05, 2, ' '120978, 0, "frameshift", "deleterious", "#575c9d", ' '"SodiumPocket MicroSwitch "], "229": ["R", 8.275e-06, ' '1, 120842, 0, "missense", "tolerated", "#70c070", ""], ' '"227": ["S", 8.28e-06, 1, 120778, 0, "missense", ' '"tolerated", "#70c070", "GP (contact) "], "210": ' '["IlefsTer14", 8.292e-06, 1, 120600, 0, "frameshift", ' '"deleterious", "#575c9d", "SodiumPocket 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home/arrestindb.html
/home/protwis/gpcrdb_test/home/templates/home/arrestindb.html
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