Structure information

NOP receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

5DHH

SPECIES

Homo sapiens

RESOLUTION

3.000

PREFERRED CHAIN

A

REFERENCE

10.1016/J.STR.2015.07.024

PUBLICATION DATE

Oct. 21, 2015

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
SB 612111 W116 23.50x50 ECL1 hydrophobic
SB 612111 D130 3.32x32 TM3 polar (charge-assisted hydrogen bond)
SB 612111 Y131 3.33x33 TM3 hydrophobic
SB 612111 Y131 3.33x33 TM3 Van der Waals
SB 612111 M134 3.36x36 TM3 hydrophobic
SB 612111 M134 3.36x36 TM3 Van der Waals
SB 612111 C200 45.50x50 ECL2 Van der Waals
SB 612111 I219 5.42x43 TM5 hydrophobic
SB 612111 V279 6.51x51 TM6 hydrophobic
SB 612111 Q280 6.52x52 TM6 Van der Waals
SB 612111 V283 6.55x55 TM6 Van der Waals
SB 612111 V283 6.55x55 TM6 hydrophobic
SB 612111 Y309 7.43x42 TM7 Van der Waals

Ligands

SB 612111

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Residue Diagrams

C N G L L G G V C V A L Y L G V I T V K 1 F N L A L A D T L V L L T L P F Q G T D 2 A T L T F T S T F M N Y Y D I A I V T K 3 A Q A V N V A I W A L A S V V G V P V A 4 Y C V S I V L V P V I F S F L F I C I A F 5 L V V V A V F V G C W T P V Q V F V L A 6 I P N L C S N V Y G L A T C F R L I A 7
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ICL1 T K M K ICL1ECL1 F W P F ECL1ICL2 P I R A L D V R ICL2ECL2 S A Q V E D E E I E C L V E I P T ECL2ICL3 R L L S G ICL3ECL3 V Q P S ECL3N-term M E P L F P A P F W E V I Y G S H L Q G N L S L L S P N H S L L P P H L L L N A S H G A F L P N-termC-term A S A L R R D V Q V S D R V R S I A K D V A L A C K T S E T V P R P A C-term L G L K V T I V G L Y L A V C V G G L L G N C L V M Y V I L R H T A T N I Y I F N L A L A D T L V L L T L P F Q G T D I L L G G N A L C K T V I A I D Y Y N M F T S T F T L T A M S V D R Y V A I C H T S S K A Q A V N V A I W A L A S V V G V P V A I M G P Q D Y W G P V F A I C I F L F S F I V P V L V I S V C Y S L M I R R L R G V S R E K D R N L R R I T R L V L V V V A V F V G C W T P V Q V F V L A Q G L G S E T A V A I L R F C T A L G Y V N S C L N P I L Y A F L D E N F R K F K A C F C C
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Residue Table


GPCRdb(A)
GPCRdb(A)
NOP receptor
ECL1
23x50 23.50x50 W116
TM3
3x32 3.32x32 D130
3x33 3.33x33 Y131
3x36 3.36x36 M134
ECL2
45x50 45.50x50 C200
TM5
5x43 5.42x43 I219
TM6
6x51 6.51x51 V279
6x52 6.52x52 Q280
6x55 6.55x55 V283
TM7
7x42 7.43x42 Y309