Structure information

A2A receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

8DU3

SPECIES

Homo sapiens

RESOLUTION

2.500

PREFERRED CHAIN

A

REFERENCE

10.1016/j.ejmech.2022.114620

PUBLICATION DATE

Aug. 10, 2022

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
CHEMBL5206530 F168 45.52x52 ECL2 aromatic (face-to-face)
CHEMBL5206530 E169 ECL2 polar (charge-assisted hydrogen bond)
CHEMBL5206530 M177 5.38x40 TM5 Van der Waals
CHEMBL5206530 M177 5.38x40 TM5 hydrophobic
CHEMBL5206530 W246 6.48x48 TM6 Van der Waals
CHEMBL5206530 W246 6.48x48 TM6 hydrophobic
CHEMBL5206530 L249 6.51x51 TM6 Van der Waals
CHEMBL5206530 L249 6.51x51 TM6 hydrophobic
CHEMBL5206530 H250 6.52x52 TM6 aromatic (face-to-edge)
CHEMBL5206530 H250 6.52x52 TM6 Van der Waals
CHEMBL5206530 N253 6.55x55 TM6 polar (hydrogen bond)
CHEMBL5206530 N253 6.55x55 TM6 polar (hydrogen bond)
CHEMBL5206530 M270 7.35x34 TM7 Van der Waals
CHEMBL5206530 I274 7.39x38 TM7 Van der Waals
CHEMBL5206530 I274 7.39x38 TM7 hydrophobic

Ligands

CHEMBL5206530

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Residue Diagrams

V N G L I A L V A I A L E V T I Y V S S 1 V S L A A A D I A V G L V A I P F A I T I 2 A L L S F I S S Q T L V L V F C A I F L 3 A K G I I A I C W V L S F A I G L T P M 4 Y V G L M L L L P V L V C A F F N F Y V M Y 5 A I I V G L F A L C W L P L H I I N C F 6 F P N V V S N T H S L V I A L Y M L W 7
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ICL1 S N L Q ICL1ECL1 F C A ECL1ICL2 P L R Y N G L V ICL2ECL2 W N N C G Q P K E G K N H S Q G C G E G Q V A C L F E D V V ECL2ICL3 Q P L P G ICL3ECL3 P D C S H A ECL3C-term K A A G T S A R V L A A H G S D G E Q V S L R L N G H P P G V W A N G S A P H P E R R P N G Y A L G L V S G G S A Q E S Q G N T G L P D V E L L S H E L K G V C P E P P G L D D P L A Q D G A G V S C-term M P I M G S S V Y I T V E L A I A V L A I L G N V L V C W A V W L N N V T N Y F V V S L A A A D I A V G V L A I P F A I T I S T G A C H G C L F I A C F V L V L T Q S S I F S L L A I A I D R Y I A I R I T G T R A K G I I A I C W V L S F A I G L T P M L G P M N Y M V Y F N F F A C V L V P L L L M L G V Y L R I F L A A R R Q L K Q M E S E R A R S T L Q K E V H A A K S L A I I V G L F A L C W L P L H I I N C F T F F C P L W L M Y L A I V L S H T N S V V N P F I Y A Y R I R E F R K H V L P F F R Q T I I R S R Q Q E
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Residue Table


GPCRdb(A)
GPCRdb(A)
A2A receptor
ECL2
45x52 45.52x52 F168
TM5
5x40 5.38x40 M177
TM6
6x48 6.48x48 W246
6x51 6.51x51 L249
6x52 6.52x52 H250
6x55 6.55x55 N253
TM7
7x34 7.35x34 M270
7x38 7.39x38 I274