SST2 receptor - Gi1

GPCR CLASS (FAMILY)

Class A (Rhodopsin)

GPCR SPECIES

Homo sapiens

GPCR PREFERRED CHAIN

A

G PROTEIN (FAMILY)

Gi/o

G PROTEIN SPECIES

Homo sapiens

PDB CODE

7XAV

RESOLUTION

2.9 Å

REFERENCE

10.1038/S41421-022-00405-2

PUBLICATION DATE

Aug. 31, 2022

3D VIEW

NGL is a WebGL based 3D viewer powered by MMTF.

LIGAND INTERACTIONS

44 interactions (Click to see)

LIGANDS

lanreotide - Agonist pubchem gtoplig drugbank

PHYSIOLOGICAL LIGANDS

CST-17, SRIF-28, cortistatin-14, SRIF-14



GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

Gα, Gβ, Gγ, GPCR
Interaction cut-off: strict (stick), loose (line)

NGL is a WebGL based 3D viewer powered by MMTF.

Interaction
type		 GPCR
Segment
AA
Number		 Generic
number		 Gα
segment
AA
Number		 Generic
number
Hydrophobic TM5 V 235 5x65 G.H5 L 348 G.H5.20
Van-der-waals TM5 V 235 5x65 G.H5 L 348 G.H5.20
Hydrophobic TM6 K 253 6x32 G.H5 F 354 G.H5.26
Van-der-waals TM6 K 253 6x32 G.H5 F 354 G.H5.26
Polar ICL3 S 245 - G.h4s6 E 318 G.h4s6.12
Hydrophobic ICL3 S 245 - G.h4s6 E 318 G.h4s6.12
Van-der-waals ICL3 S 245 - G.h4s6 E 318 G.h4s6.12
Hydrophobic TM6 V 254 6x33 G.H5 L 348 G.H5.20
Hydrophobic H8 S 316 8x47 G.H5 G 352 G.H5.24
Van-der-waals H8 S 316 8x47 G.H5 G 352 G.H5.24
Ionic TM4 R 155 4x38 G.HN E 28 G.HN.52
Hydrophobic TM4 R 155 4x38 G.HN E 28 G.HN.52
Van-der-waals TM4 R 155 4x38 G.HN E 28 G.HN.52
Hydrophobic TM6 V 258 6x37 G.H5 L 353 G.H5.25
Van-der-waals TM6 V 254 6x33 G.H5 L 353 G.H5.25
Polar TM6 R 247 6x26 G.h4s6 D 315 G.h4s6.09
Hydrophobic TM6 R 247 6x26 G.h4s6 D 315 G.h4s6.09
Van-der-waals TM6 R 247 6x26 G.h4s6 D 315 G.h4s6.09
Hydrophobic TM6 S 250 6x29 G.H5 F 354 G.H5.26
Van-der-waals TM6 S 250 6x29 G.H5 F 354 G.H5.26
Hydrophobic ICL2 P 147 - G.H5 I 344 G.H5.16
Van-der-waals ICL2 P 147 - G.H5 I 344 G.H5.16
Hydrophobic TM3 A 143 3x53 G.H5 C 351 G.H5.23
Hydrophobic ICL3 V 242 - G.H5 D 337 G.H5.09
Hydrophobic TM5 I 231 5x61 G.H5 L 353 G.H5.25
Hydrophobic TM5 Y 228 5x58 G.H5 L 353 G.H5.25
Hydrophobic TM3 A 143 3x53 G.H5 N 347 G.H5.19
Van-der-waals TM3 A 143 3x53 G.H5 N 347 G.H5.19
Hydrophobic TM3 V 144 3x54 G.H5 N 347 G.H5.19
Van-der-waals H8 D 317 8x48 G.H5 F 354 G.H5.26
Hydrophobic ICL2 I 148 - G.s2s3 D 193 G.s2s3.02
Polar TM3 R 140 3x50 G.H5 C 351 G.H5.23
Hydrophobic TM3 R 140 3x50 G.H5 C 351 G.H5.23
Van-der-waals TM3 R 140 3x50 G.H5 C 351 G.H5.23
Hydrophobic TM3 V 144 3x54 G.H5 L 348 G.H5.20
Van-der-waals TM3 V 144 3x54 G.H5 L 348 G.H5.20
Hydrophobic ICL2 I 148 - G.H5 F 336 G.H5.08
Polar ICL3 G 239 - G.H5 D 341 G.H5.13
Hydrophobic TM5 I 231 5x61 G.H5 L 348 G.H5.20
Hydrophobic ICL2 A 151 - G.hns1 R 32 G.hns1.03
Van-der-waals ICL2 A 151 - G.hns1 R 32 G.hns1.03
Hydrophobic ICL2 P 147 - G.H5 I 343 G.H5.15
Van-der-waals ICL2 P 147 - G.H5 I 343 G.H5.15
Ionic TM6 R 247 6x26 G.h4s6 E 318 G.h4s6.12
Polar TM6 R 247 6x26 G.h4s6 E 318 G.h4s6.12
Hydrophobic TM6 R 247 6x26 G.h4s6 E 318 G.h4s6.12
Van-der-waals TM6 R 247 6x26 G.h4s6 E 318 G.h4s6.12
Polar H8 S 316 8x47 G.H5 D 350 G.H5.22
Van-der-waals H8 S 316 8x47 G.H5 D 350 G.H5.22
Hydrophobic TM6 V 254 6x33 G.H5 F 354 G.H5.26
Hydrophobic TM3 R 140 3x50 G.H5 L 353 G.H5.25
Polar TM6 R 247 6x26 G.h4s6 K 314 G.h4s6.08
Van-der-waals TM6 R 247 6x26 G.h4s6 K 314 G.h4s6.08
Polar TM6 R 247 6x26 G.h4s6 K 317 G.h4s6.11
Polar TM5 S 238 5x68 G.H5 D 341 G.H5.13
Van-der-waals TM5 S 238 5x68 G.H5 D 341 G.H5.13
Hydrophobic TM3 V 144 3x54 G.H5 I 344 G.H5.16
Van-der-waals TM3 V 144 3x54 G.H5 I 344 G.H5.16