TA1 receptor - Gq

GPCR CLASS (FAMILY)

Class A (Rhodopsin)

GPCR SPECIES

Mus musculus

GPCR PREFERRED CHAIN

R

G PROTEIN (FAMILY)

Gq/11

G PROTEIN SPECIES

Homo sapiens

PDB CODE

8WC9

RESOLUTION

3.2 Å

REFERENCE

10.1016/J.CELL.2023.10.014

PUBLICATION DATE

Dec. 27, 2023

3D VIEW

NGL is a WebGL based 3D viewer powered by MMTF.

LIGAND INTERACTIONS

22 interactions (Click to see)

LIGANDS

CHEMBL476516 - Agonist chembl_ligand pubchem

PHYSIOLOGICAL LIGANDS

3-iodothyronamine, β-phenylethylamine, tyramine



GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

Gα, Gβ, Gγ, GPCR
Interaction cut-off: strict (stick), loose (line)

NGL is a WebGL based 3D viewer powered by MMTF.

Interaction
type		 GPCR
Segment
AA
Number		 Generic
number		 Gα
segment
AA
Number		 Generic
number
Polar TM5 Q 219 5x68 G.H5 Q 385 G.H5.17
Van-der-waals TM5 Q 219 5x68 G.H5 Q 385 G.H5.17
Polar TM3 A 123 3x53 G.H5 N 387 G.H5.19
Hydrophobic TM3 V 124 3x54 G.H5 L 388 G.H5.20
Van-der-waals TM3 V 124 3x54 G.H5 L 388 G.H5.20
Hydrophobic TM3 A 123 3x53 G.H5 Y 391 G.H5.23
Van-der-waals TM3 A 123 3x53 G.H5 Y 391 G.H5.23
Hydrophobic ICL2 A 132 - G.hns1 R 39 G.hns1.03
Hydrophobic ICL2 P 127 - G.H5 K 380 G.H5.12
Van-der-waals ICL2 P 127 - G.H5 K 380 G.H5.12
Polar ICL2 Y 130 - G.H5 Y 391 G.H5.23
Polar ICL4 F 304 - G.H5 N 392 G.H5.24
Van-der-waals ICL4 F 304 - G.H5 N 392 G.H5.24
Hydrophobic TM3 V 124 3x54 G.H5 L 384 G.H5.16
Van-der-waals TM3 V 124 3x54 G.H5 L 384 G.H5.16
Hydrophobic ICL2 L 128 - G.S3 V 217 G.S3.01
Hydrophobic ICL2 R 129 - G.S3 V 217 G.S3.01
Hydrophobic ICL3 A 220 - G.H5 V 394 G.H5.26
Van-der-waals ICL3 A 220 - G.H5 V 394 G.H5.26
Polar TM6 A 246 6x33 G.H5 L 393 G.H5.25
Hydrophobic TM6 A 246 6x33 G.H5 L 393 G.H5.25
Hydrophobic H8 Y 305 8x47 G.H5 N 392 G.H5.24
Hydrophobic ICL2 L 128 - G.S1 L 41 G.S1.02
Van-der-waals ICL2 L 128 - G.S1 L 41 G.S1.02
Hydrophobic TM5 A 216 5x65 G.H5 L 388 G.H5.20
Hydrophobic ICL2 L 128 - G.H5 F 376 G.H5.08
Van-der-waals ICL2 L 128 - G.H5 F 376 G.H5.08
Hydrophobic ICL2 P 127 - G.H5 L 384 G.H5.16
Polar TM6 T 249 6x36 G.H5 N 392 G.H5.24
Hydrophobic TM5 A 216 5x65 G.H5 L 393 G.H5.25
Aromatic TM3 R 120 3x50 G.H5 Y 391 G.H5.23
Hydrophobic TM3 R 120 3x50 G.H5 Y 391 G.H5.23
Hydrophobic TM6 L 250 6x37 G.H5 L 393 G.H5.25
Hydrophobic H8 Y 305 8x47 G.H5 Y 391 G.H5.23
Hydrophobic ICL2 L 128 - G.H5 K 380 G.H5.12
Hydrophobic TM5 Q 219 5x68 G.H5 L 384 G.H5.16
Hydrophobic ICL2 P 127 - G.H5 I 383 G.H5.15
Polar ICL2 K 131 - G.hns1 R 38 G.hns1.02
Hydrophobic ICL2 K 131 - G.hns1 R 38 G.hns1.02
Hydrophobic ICL2 L 128 - G.H5 I 383 G.H5.15
Van-der-waals ICL2 L 128 - G.H5 I 383 G.H5.15
Hydrophobic TM5 I 212 5x61 G.H5 L 393 G.H5.25
Polar H8 W 307 8x49 G.H5 E 390 G.H5.22
Van-der-waals H8 W 307 8x49 G.H5 E 390 G.H5.22
Hydrophobic TM3 V 124 3x54 G.H5 Y 391 G.H5.23