TA1 receptor - Gs

GPCR CLASS (FAMILY)

Class A (Rhodopsin)

GPCR SPECIES

Homo sapiens

GPCR PREFERRED CHAIN

R

G PROTEIN (FAMILY)

Gs

G PROTEIN SPECIES

Homo sapiens

PDB CODE

8WCA

RESOLUTION

3.5 Å

REFERENCE

10.1016/J.CELL.2023.10.014

PUBLICATION DATE

Dec. 27, 2023

3D VIEW

NGL is a WebGL based 3D viewer powered by MMTF.

LIGAND INTERACTIONS

15 interactions (Click to see)

LIGANDS

2-Phenylethanaminium - Agonist pubchem

PHYSIOLOGICAL LIGANDS

(+)-Octopamine, CHEMBL1160703, β-phenylethylamine, tyramine, octopamine, dopamine, 3-iodothyronamine



GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

Gα, Gβ, Gγ, GPCR
Interaction cut-off: strict (stick), loose (line)

NGL is a WebGL based 3D viewer powered by MMTF.

Interaction
type		 GPCR
Segment
AA
Number		 Generic
number		 Gα
segment
AA
Number		 Generic
number
Hydrophobic TM5 I 213 5x61 G.H5 L 360 G.H5.25
Van-der-waals TM5 I 213 5x61 G.H5 L 360 G.H5.25
Hydrophobic H8 P 309 8x48 G.H5 E 359 G.H5.24
Van-der-waals H8 P 309 8x48 G.H5 E 359 G.H5.24
Hydrophobic ICL2 K 132 - G.hns1 R 31 G.hns1.02
Hydrophobic TM3 V 125 3x54 G.H5 H 354 G.H5.19
Van-der-waals TM3 V 125 3x54 G.H5 H 354 G.H5.19
Hydrophobic TM5 A 217 5x65 G.H5 L 360 G.H5.25
Van-der-waals TM5 A 217 5x65 G.H5 L 360 G.H5.25
Hydrophobic TM5 I 224 5x72 G.h4s6 Y 325 G.h4s6.20
Hydrophobic TM5 I 216 5x64 G.H5 Q 351 G.H5.16
Hydrophobic ICL2 L 129 - G.H5 F 343 G.H5.08
Van-der-waals ICL2 L 129 - G.H5 F 343 G.H5.08
Polar TM5 Q 220 5x68 G.H5 R 352 G.H5.17
Hydrophobic TM6 L 253 6x37 G.H5 L 360 G.H5.25
Hydrophobic ICL2 L 129 - G.H5 I 350 G.H5.15
Hydrophobic ICL2 P 128 - G.H5 I 350 G.H5.15
Van-der-waals ICL2 P 128 - G.H5 I 350 G.H5.15
Hydrophobic ICL2 L 129 - G.H5 C 346 G.H5.11
Van-der-waals ICL2 L 129 - G.H5 C 346 G.H5.11
Polar H8 W 310 8x49 G.H5 Q 357 G.H5.22
Hydrophobic TM5 Q 220 5x68 G.H5 L 361 G.H5.26
Hydrophobic ICL2 L 129 - G.H5 R 347 G.H5.12
Polar TM3 A 124 3x53 G.H5 H 354 G.H5.19
Hydrophobic TM3 A 124 3x53 G.H5 H 354 G.H5.19
Van-der-waals TM3 A 124 3x53 G.H5 H 354 G.H5.19
Hydrophobic TM3 V 125 3x54 G.H5 L 355 G.H5.20
Hydrophobic TM3 A 124 3x53 G.H5 Y 358 G.H5.23
Van-der-waals TM3 A 124 3x53 G.H5 Y 358 G.H5.23
Polar ICL2 L 129 - G.S1 H 34 G.S1.02
Hydrophobic ICL2 L 129 - G.S1 H 34 G.S1.02
Van-der-waals ICL2 L 129 - G.S1 H 34 G.S1.02
Polar ICL2 R 130 - G.s2s3 D 192 G.s2s3.01
Van-der-waals ICL2 R 130 - G.s2s3 D 192 G.s2s3.01
Van-der-waals TM5 Q 220 5x68 G.H5 Q 351 G.H5.16
Hydrophobic TM5 Q 220 5x68 G.H5 L 355 G.H5.20
Van-der-waals TM7 F 307 7x56 G.H5 E 359 G.H5.24
Hydrophobic ICL2 Y 131 - G.H5 H 354 G.H5.19
Hydrophobic ICL2 P 128 - G.H5 H 354 G.H5.19
Hydrophobic ICL2 P 128 - G.H5 Q 351 G.H5.16
Hydrophobic ICL2 A 133 - G.hns1 A 32 G.hns1.03
Van-der-waals ICL2 A 133 - G.hns1 A 32 G.hns1.03
Hydrophobic H8 Y 308 8x47 G.H5 E 359 G.H5.24
Hydrophobic TM6 A 249 6x33 G.H5 L 360 G.H5.25
Van-der-waals TM6 A 249 6x33 G.H5 L 360 G.H5.25
Hydrophobic TM5 I 224 5x72 G.H5 R 352 G.H5.17
Van-der-waals TM5 I 224 5x72 G.H5 R 352 G.H5.17
Aromatic TM3 R 121 3x50 G.H5 Y 358 G.H5.23
Hydrophobic TM3 R 121 3x50 G.H5 Y 358 G.H5.23
Van-der-waals TM3 R 121 3x50 G.H5 Y 358 G.H5.23
Hydrophobic ICL2 P 128 - G.H5 R 347 G.H5.12
Van-der-waals ICL2 P 128 - G.H5 R 347 G.H5.12
Hydrophobic ICL2 R 130 - G.S3 V 194 G.S3.01