G12 -
HCA1 receptor complex model
GPCR CLASS (FAMILY)
SPECIES
G PROTEIN FAMILY
DATE
3D VIEW
Tertiary structure confidence
(pLDDT score) avg.: 79.6
Confident (90-70)
Low (70-50)
Very low (<50)
Disordered
PTM Score: 0.7
iPTM Score: 0.6
PAE mean: 15.6
GPCR - G protein interface interactions
The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle
(Gα residues)
and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid,
hydrophobic - dashed,
ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.
GPCR-G protein backbone (bb) or sidechain (sc):
Structures
0 structures selected.
Sequence Color
Interaction frequency filter (%)
Gα,
GPCR
Interaction cut-off: strict (stick), loose (line)
Interaction type |
GPCR Segment |
AA |
Number |
Generic number |
Gα segment |
AA |
Number |
Generic number |
---|---|---|---|---|---|---|---|---|
Polar | TM3 | R | 113 | 3x50 | G.H5 | I | 378 | G.H5.23 |
Hydrophobic | TM3 | R | 113 | 3x50 | G.H5 | I | 378 | G.H5.23 |
Polar | H8 | S | 284 | 8x49 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | H8 | S | 284 | 8x49 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | H8 | S | 284 | 8x49 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | TM6 | M | 215 | 6x30 | G.H5 | L | 375 | G.H5.20 |
Van-der-waals | TM6 | M | 215 | 6x30 | G.H5 | L | 375 | G.H5.20 |
Hydrophobic | ICL1 | M | 44 | - | G.H5 | L | 380 | G.H5.25 |
Ionic | ICL3 | R | 206 | - | G.H5 | D | 368 | G.H5.13 |
Polar | ICL3 | R | 206 | - | G.H5 | D | 368 | G.H5.13 |
Hydrophobic | ICL3 | R | 206 | - | G.H5 | D | 368 | G.H5.13 |
Van-der-waals | ICL3 | R | 206 | - | G.H5 | D | 368 | G.H5.13 |
Ionic | C-term | E | 344 | - | G.s4h3 | R | 265 | G.s4h3.12 |
Polar | C-term | E | 344 | - | G.s4h3 | R | 265 | G.s4h3.12 |
Hydrophobic | C-term | E | 344 | - | G.s4h3 | R | 265 | G.s4h3.12 |
Van-der-waals | C-term | E | 344 | - | G.s4h3 | R | 265 | G.s4h3.12 |
Hydrophobic | ICL3 | L | 209 | - | G.H5 | D | 368 | G.H5.13 |
Van-der-waals | ICL3 | L | 209 | - | G.H5 | D | 368 | G.H5.13 |
Hydrophobic | ICL2 | P | 120 | 34x50 | G.H5 | I | 370 | G.H5.15 |
Van-der-waals | ICL2 | P | 120 | 34x50 | G.H5 | I | 370 | G.H5.15 |
Polar | H8 | S | 282 | 8x47 | G.H5 | M | 379 | G.H5.24 |
Hydrophobic | H8 | S | 282 | 8x47 | G.H5 | M | 379 | G.H5.24 |
Van-der-waals | H8 | S | 282 | 8x47 | G.H5 | M | 379 | G.H5.24 |
Polar | C-term | H | 346 | - | H.hdhe | Q | 174 | H.hdhe.02 |
Hydrophobic | C-term | H | 346 | - | H.hdhe | Q | 174 | H.hdhe.02 |
Van-der-waals | C-term | H | 346 | - | H.hdhe | Q | 174 | H.hdhe.02 |
Hydrophobic | C-term | I | 342 | - | H.HA | D | 110 | H.HA.24 |
Van-der-waals | C-term | I | 342 | - | H.HA | D | 110 | H.HA.24 |
Hydrophobic | ICL2 | H | 121 | 34x51 | G.H5 | K | 367 | G.H5.12 |
Polar | TM6 | R | 214 | 6x29 | G.H5 | Q | 381 | G.H5.26 |
Van-der-waals | TM6 | R | 214 | 6x29 | G.H5 | Q | 381 | G.H5.26 |
Polar | H8 | S | 282 | 8x47 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | H8 | S | 282 | 8x47 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | H8 | S | 282 | 8x47 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | TM6 | A | 218 | 6x33 | G.H5 | M | 379 | G.H5.24 |
Van-der-waals | TM6 | A | 218 | 6x33 | G.H5 | M | 379 | G.H5.24 |
Hydrophobic | TM6 | M | 215 | 6x30 | G.H5 | L | 371 | G.H5.16 |
Van-der-waals | TM6 | M | 215 | 6x30 | G.H5 | L | 371 | G.H5.16 |
Hydrophobic | TM7 | Y | 279 | 7x54 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | ICL3 | L | 209 | - | G.S6 | F | 347 | G.S6.02 |
Polar | TM3 | K | 116 | 3x53 | G.H5 | N | 374 | G.H5.19 |
Hydrophobic | TM3 | K | 116 | 3x53 | G.H5 | N | 374 | G.H5.19 |
Van-der-waals | TM3 | K | 116 | 3x53 | G.H5 | N | 374 | G.H5.19 |
Polar | ICL3 | R | 206 | - | G.H5 | K | 367 | G.H5.12 |
Hydrophobic | ICL3 | R | 206 | - | G.H5 | K | 367 | G.H5.12 |
Van-der-waals | ICL3 | R | 206 | - | G.H5 | K | 367 | G.H5.12 |
Hydrophobic | TM3 | V | 117 | 3x54 | G.H5 | L | 371 | G.H5.16 |
Van-der-waals | TM3 | V | 117 | 3x54 | G.H5 | L | 371 | G.H5.16 |
Hydrophobic | ICL3 | R | 206 | - | G.H5 | L | 371 | G.H5.16 |
Van-der-waals | ICL3 | R | 206 | - | G.H5 | L | 371 | G.H5.16 |
Hydrophobic | ICL3 | L | 209 | - | G.H5 | L | 371 | G.H5.16 |
Hydrophobic | TM6 | F | 221 | 6x36 | G.H5 | I | 378 | G.H5.23 |
Hydrophobic | C-term | I | 342 | - | H.HA | K | 114 | H.HA.28 |
Van-der-waals | C-term | I | 342 | - | H.HA | K | 114 | H.HA.28 |
Hydrophobic | C-term | W | 345 | - | H.HA | L | 115 | H.HA.29 |
Van-der-waals | C-term | W | 345 | - | H.HA | L | 115 | H.HA.29 |
Polar | ICL2 | I | 127 | 34x57 | G.hns1 | R | 55 | G.hns1.02 |
Van-der-waals | ICL2 | I | 127 | 34x57 | G.hns1 | R | 55 | G.hns1.02 |
Polar | C-term | W | 345 | - | G.s4h3 | R | 265 | G.s4h3.12 |
Van-der-waals | C-term | W | 345 | - | G.s4h3 | R | 265 | G.s4h3.12 |
Hydrophobic | ICL3 | L | 209 | - | G.H5 | Q | 372 | G.H5.17 |
Van-der-waals | ICL3 | L | 209 | - | G.H5 | Q | 372 | G.H5.17 |
Hydrophobic | TM4 | S | 128 | 4x38 | G.hns1 | R | 55 | G.hns1.02 |
Van-der-waals | TM4 | S | 128 | 4x38 | G.hns1 | R | 55 | G.hns1.02 |
Hydrophobic | ICL2 | A | 123 | 34x53 | G.hns1 | R | 56 | G.hns1.03 |
Van-der-waals | ICL2 | A | 123 | 34x53 | G.hns1 | R | 56 | G.hns1.03 |
Hydrophobic | TM5 | L | 203 | 5x65 | G.H5 | L | 371 | G.H5.16 |
Hydrophobic | TM6 | Q | 212 | 6x27 | G.h4s6 | P | 345 | G.h4s6.20 |
Van-der-waals | TM6 | Q | 212 | 6x27 | G.h4s6 | P | 345 | G.h4s6.20 |
Hydrophobic | C-term | H | 346 | - | G.s4h3 | V | 260 | G.s4h3.07 |
Van-der-waals | C-term | H | 346 | - | G.s4h3 | V | 260 | G.s4h3.07 |
Hydrophobic | TM6 | F | 221 | 6x36 | G.H5 | M | 379 | G.H5.24 |
Van-der-waals | TM6 | F | 221 | 6x36 | G.H5 | M | 379 | G.H5.24 |
Polar | C-term | H | 346 | - | G.s4h3 | R | 265 | G.s4h3.12 |
Aromatic | C-term | H | 346 | - | G.s4h3 | R | 265 | G.s4h3.12 |
Hydrophobic | C-term | H | 346 | - | G.s4h3 | R | 265 | G.s4h3.12 |
Van-der-waals | C-term | H | 346 | - | G.s4h3 | R | 265 | G.s4h3.12 |
Hydrophobic | ICL2 | H | 121 | 34x51 | G.S3 | I | 221 | G.S3.01 |
Van-der-waals | ICL2 | H | 121 | 34x51 | G.S3 | I | 221 | G.S3.01 |
Hydrophobic | TM6 | A | 218 | 6x33 | G.H5 | L | 375 | G.H5.20 |
Van-der-waals | TM6 | A | 218 | 6x33 | G.H5 | L | 375 | G.H5.20 |
Polar | ICL2 | T | 126 | 34x56 | G.hns1 | R | 55 | G.hns1.02 |
Hydrophobic | ICL2 | T | 126 | 34x56 | G.hns1 | R | 55 | G.hns1.02 |
Van-der-waals | ICL2 | T | 126 | 34x56 | G.hns1 | R | 55 | G.hns1.02 |
Hydrophobic | TM3 | V | 117 | 3x54 | G.H5 | L | 375 | G.H5.20 |
Hydrophobic | C-term | H | 346 | - | H.HD | E | 172 | H.HD.12 |
Van-der-waals | C-term | H | 346 | - | H.HD | E | 172 | H.HD.12 |
Hydrophobic | TM1 | F | 40 | 1x57 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | ICL2 | P | 120 | 34x50 | G.H5 | K | 367 | G.H5.12 |
Van-der-waals | ICL2 | P | 120 | 34x50 | G.H5 | K | 367 | G.H5.12 |
Polar | C-term | W | 345 | - | H.HA | K | 114 | H.HA.28 |
Hydrophobic | C-term | W | 345 | - | H.HA | K | 114 | H.HA.28 |
Van-der-waals | C-term | W | 345 | - | H.HA | K | 114 | H.HA.28 |
Hydrophobic | TM5 | L | 203 | 5x65 | G.H5 | L | 375 | G.H5.20 |
Polar | C-term | P | 340 | - | H.HA | R | 106 | H.HA.20 |
Van-der-waals | C-term | P | 340 | - | H.HA | R | 106 | H.HA.20 |
Hydrophobic | C-term | V | 343 | - | H.HA | V | 107 | H.HA.21 |
Van-der-waals | C-term | V | 343 | - | H.HA | V | 107 | H.HA.21 |
Hydrophobic | C-term | V | 343 | - | H.hdhe | F | 173 | H.hdhe.01 |
Polar | C-term | V | 343 | - | H.HA | D | 110 | H.HA.24 |
Hydrophobic | C-term | V | 343 | - | H.HA | D | 110 | H.HA.24 |
Van-der-waals | C-term | V | 343 | - | H.HA | D | 110 | H.HA.24 |
Ionic | TM2 | K | 48 | 2x37 | G.H5 | D | 377 | G.H5.22 |
Polar | TM2 | K | 48 | 2x37 | G.H5 | D | 377 | G.H5.22 |
Hydrophobic | TM2 | K | 48 | 2x37 | G.H5 | D | 377 | G.H5.22 |
Van-der-waals | TM2 | K | 48 | 2x37 | G.H5 | D | 377 | G.H5.22 |
Hydrophobic | ICL2 | H | 121 | 34x51 | G.H5 | V | 366 | G.H5.11 |
Hydrophobic | TM6 | M | 215 | 6x30 | G.H5 | Q | 372 | G.H5.17 |
Polar | TM3 | V | 118 | 3x55 | G.H5 | K | 367 | G.H5.12 |
Van-der-waals | TM3 | V | 118 | 3x55 | G.H5 | K | 367 | G.H5.12 |
Polar | C-term | V | 343 | - | H.HA | K | 114 | H.HA.28 |
Hydrophobic | C-term | V | 343 | - | H.HA | K | 114 | H.HA.28 |
Van-der-waals | C-term | V | 343 | - | H.HA | K | 114 | H.HA.28 |
Hydrophobic | TM3 | K | 116 | 3x53 | G.H5 | I | 378 | G.H5.23 |
Aromatic | ICL2 | H | 122 | 34x52 | G.hns1 | R | 56 | G.hns1.03 |
Hydrophobic | ICL2 | H | 122 | 34x52 | G.hns1 | R | 56 | G.hns1.03 |
Hydrophobic | ICL2 | H | 121 | 34x51 | G.H5 | I | 370 | G.H5.15 |
Van-der-waals | ICL2 | H | 121 | 34x51 | G.H5 | I | 370 | G.H5.15 |
Polar | TM6 | Q | 212 | 6x27 | G.H5 | Q | 372 | G.H5.17 |
Hydrophobic | TM6 | R | 214 | 6x29 | G.H5 | K | 376 | G.H5.21 |
Hydrophobic | TM3 | V | 117 | 3x54 | G.H5 | I | 378 | G.H5.23 |
Van-der-waals | TM3 | V | 117 | 3x54 | G.H5 | I | 378 | G.H5.23 |
Hydrophobic | TM7 | Y | 278 | 7x53 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | TM7 | Y | 278 | 7x53 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | H8 | S | 284 | 8x49 | G.H5 | Q | 381 | G.H5.26 |
Van-der-waals | H8 | S | 284 | 8x49 | G.H5 | Q | 381 | G.H5.26 |
Hydrophobic | C-term | H | 346 | - | H.hdhe | F | 173 | H.hdhe.01 |
Hydrophobic | TM6 | K | 217 | 6x32 | G.H5 | M | 379 | G.H5.24 |
Van-der-waals | TM6 | K | 217 | 6x32 | G.H5 | M | 379 | G.H5.24 |
Hydrophobic | ICL2 | T | 126 | 34x56 | G.hns1 | R | 56 | G.hns1.03 |
Van-der-waals | ICL2 | T | 126 | 34x56 | G.hns1 | R | 56 | G.hns1.03 |
Hydrophobic | TM2 | L | 54 | 2x43 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | TM2 | L | 54 | 2x43 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | ICL2 | H | 121 | 34x51 | G.S1 | V | 58 | G.S1.02 |
Van-der-waals | ICL2 | H | 121 | 34x51 | G.S1 | V | 58 | G.S1.02 |
Polar | ICL2 | H | 121 | 34x51 | G.hns1 | R | 56 | G.hns1.03 |
Hydrophobic | C-term | V | 343 | - | H.HA | A | 111 | H.HA.25 |
Hydrophobic | H8 | P | 283 | 8x48 | G.H5 | Q | 381 | G.H5.26 |
Van-der-waals | H8 | P | 283 | 8x48 | G.H5 | Q | 381 | G.H5.26 |