G12 - OR51I2 complex model

GPCR CLASS (FAMILY)

O1 (fish-like odorant)

SPECIES

Homo sapiens

G PROTEIN FAMILY

G12/13

DATE

2023-09-15

3D VIEW

NGL is a WebGL based 3D viewer powered by MMTF.


Tertiary structure confidence

(pLDDT score) avg.: 83.2

Very high (>90)
Confident (90-70)
Low (70-50)
Very low (<50)
Disordered

PTM Score: 0.7
01
iPTM Score: 0.7
01
PAE mean: 15.7
031


GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:
R37R41R52G.HNL25Q26G.H5GproteinE8x49V1x59T8x47K8x48T4x39H8x60GPCRInteractions:AromaticHydrophobicIonicPolarVan der waalsG Protein segments:G.HNG.H5GPCR segments:TM1TM4H8

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

ACDEFGHIKLMNPQRSTVWY-_+van-der-waalshydrophobicionicaromaticpolar
1x5912x4812x512x372x392x402x413x503x533x543x5534x5034x5134x5234x5334x5434x554x384x396x296x326x336x366x397x537x568x478x488x498x60G.H5.26G.H5.25G.H5.24G.H5.23G.H5.22G.H5.21G.H5.20G.H5.19G.H5.17G.H5.16G.H5.15G.H5.12G.H5.11G.H5.08G.S3.01G.s2s3.02G.s2s3.01G.S1.02G.hns1.03G.hns1.02G.HN.52G.HN.44G.HN.41G.HN.37Res. Pos.OR51I2 (AFM_O51I2_HUMAN_GNA12_HUMAN)- (AFM_O51I2_HUMAN_GNA12_HUMAN)------------------------------VPHEMYYRAICPLRYATTTEKATSYKTKEHPHVEMYYPLRYATRAICTTEKATSYKTKEHDRRDRILKILNFVVIKKRLQKMQR

, GPCR
Interaction cut-off: strict (stick), loose (line)

NGL is a WebGL based 3D viewer powered by MMTF.