GPCR CLASS (FAMILY)
SPECIES
G PROTEIN FAMILY
DATE
3D VIEW
Tertiary structure confidence
(pLDDT score) avg.: 78.5
Confident (90-70)
Low (70-50)
Very low (<50)
Disordered
PTM Score: 0.5
iPTM Score: 0.6
PAE mean: 18.1
GPCR - G protein interface interactions
The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle
(Gα residues)
and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid,
hydrophobic - dashed,
ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.
GPCR-G protein backbone (bb) or sidechain (sc):
Structures
0 structures selected.
Sequence Color
Interaction frequency filter (%)
Gα,
GPCR
Interaction cut-off: strict (stick), loose (line)
Interaction type |
GPCR Segment |
AA |
Number |
Generic number |
Gα segment |
AA |
Number |
Generic number |
---|---|---|---|---|---|---|---|---|
Hydrophobic | TM2 | Y | 440 | 2x39 | G.H5 | Q | 381 | G.H5.26 |
Van-der-waals | TM2 | Y | 440 | 2x39 | G.H5 | Q | 381 | G.H5.26 |
Aromatic | ICL2 | F | 518 | 34x51 | G.H5 | F | 363 | G.H5.08 |
Hydrophobic | ICL2 | F | 518 | 34x51 | G.H5 | F | 363 | G.H5.08 |
Van-der-waals | ICL2 | F | 518 | 34x51 | G.H5 | F | 363 | G.H5.08 |
Hydrophobic | TM5 | V | 606 | 5x65 | G.H5 | L | 375 | G.H5.20 |
Van-der-waals | TM5 | V | 606 | 5x65 | G.H5 | L | 375 | G.H5.20 |
Polar | TM6 | Q | 619 | 6x26 | G.H5 | Q | 372 | G.H5.17 |
Hydrophobic | TM6 | Q | 619 | 6x26 | G.H5 | Q | 372 | G.H5.17 |
Van-der-waals | TM6 | Q | 619 | 6x26 | G.H5 | Q | 372 | G.H5.17 |
Hydrophobic | ICL2 | V | 521 | 34x54 | G.HN | R | 52 | G.HN.52 |
Van-der-waals | ICL2 | V | 521 | 34x54 | G.HN | R | 52 | G.HN.52 |
Hydrophobic | TM6 | I | 616 | 6x23 | G.h4s6 | R | 342 | G.h4s6.11 |
Van-der-waals | TM6 | I | 616 | 6x23 | G.h4s6 | R | 342 | G.h4s6.11 |
Hydrophobic | TM3 | I | 514 | 3x54 | G.H5 | L | 375 | G.H5.20 |
Van-der-waals | TM3 | I | 514 | 3x54 | G.H5 | L | 375 | G.H5.20 |
Hydrophobic | ICL2 | F | 518 | 34x51 | G.H5 | I | 370 | G.H5.15 |
Van-der-waals | ICL2 | F | 518 | 34x51 | G.H5 | I | 370 | G.H5.15 |
Hydrophobic | TM6 | I | 616 | 6x23 | G.h4s6 | K | 344 | G.h4s6.19 |
Van-der-waals | TM6 | I | 616 | 6x23 | G.h4s6 | K | 344 | G.h4s6.19 |
Hydrophobic | TM6 | I | 625 | 6x32 | G.H5 | M | 379 | G.H5.24 |
Ionic | ICL2 | R | 522 | 34x55 | G.H5 | D | 377 | G.H5.22 |
Polar | ICL2 | R | 522 | 34x55 | G.H5 | D | 377 | G.H5.22 |
Van-der-waals | ICL2 | R | 522 | 34x55 | G.H5 | D | 377 | G.H5.22 |
Van-der-waals | TM7 | Y | 681 | 7x53 | G.H5 | Q | 381 | G.H5.26 |
Hydrophobic | TM6 | F | 630 | 6x37 | G.H5 | I | 378 | G.H5.23 |
Hydrophobic | ICL2 | V | 521 | 34x54 | G.hns1 | R | 56 | G.hns1.03 |
Van-der-waals | ICL2 | V | 521 | 34x54 | G.hns1 | R | 56 | G.hns1.03 |
Hydrophobic | ICL2 | F | 518 | 34x51 | G.H5 | K | 367 | G.H5.12 |
Van-der-waals | ICL2 | F | 518 | 34x51 | G.H5 | K | 367 | G.H5.12 |
Hydrophobic | H8 | R | 686 | 8x48 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | ICL2 | P | 517 | 34x50 | G.H5 | L | 371 | G.H5.16 |
Hydrophobic | TM5 | T | 612 | 5x71 | G.S6 | F | 347 | G.S6.02 |
Polar | TM5 | S | 605 | 5x64 | G.H5 | K | 367 | G.H5.12 |
Polar | TM5 | S | 609 | 5x68 | G.H5 | D | 368 | G.H5.13 |
Hydrophobic | TM5 | S | 609 | 5x68 | G.H5 | D | 368 | G.H5.13 |
Van-der-waals | TM5 | S | 609 | 5x68 | G.H5 | D | 368 | G.H5.13 |
Hydrophobic | TM5 | S | 609 | 5x68 | G.H5 | L | 371 | G.H5.16 |
Van-der-waals | TM5 | S | 609 | 5x68 | G.H5 | L | 371 | G.H5.16 |
Hydrophobic | TM6 | I | 616 | 6x23 | G.h4s6 | R | 339 | G.h4s6.08 |
Polar | TM6 | R | 629 | 6x36 | G.H5 | Q | 381 | G.H5.26 |
Hydrophobic | TM6 | R | 629 | 6x36 | G.H5 | Q | 381 | G.H5.26 |
Van-der-waals | TM6 | R | 629 | 6x36 | G.H5 | Q | 381 | G.H5.26 |
Hydrophobic | TM3 | K | 510 | 3x50 | G.H5 | I | 378 | G.H5.23 |
Hydrophobic | H8 | T | 685 | 8x47 | G.H5 | Q | 381 | G.H5.26 |
Van-der-waals | H8 | T | 685 | 8x47 | G.H5 | Q | 381 | G.H5.26 |
Hydrophobic | TM6 | I | 616 | 6x23 | G.h4s6 | S | 343 | G.h4s6.12 |
Hydrophobic | TM6 | I | 616 | 6x23 | G.h4s6 | P | 345 | G.h4s6.20 |
Van-der-waals | TM6 | I | 616 | 6x23 | G.h4s6 | P | 345 | G.h4s6.20 |
Hydrophobic | ICL2 | P | 517 | 34x50 | G.H5 | K | 367 | G.H5.12 |
Van-der-waals | ICL2 | P | 517 | 34x50 | G.H5 | K | 367 | G.H5.12 |
Hydrophobic | TM6 | K | 622 | 6x29 | G.H5 | M | 379 | G.H5.24 |
Polar | TM6 | R | 629 | 6x36 | G.H5 | I | 378 | G.H5.23 |
Van-der-waals | TM6 | R | 629 | 6x36 | G.H5 | I | 378 | G.H5.23 |
Hydrophobic | TM5 | A | 613 | 5x72 | G.S6 | F | 347 | G.S6.02 |
Van-der-waals | TM1 | R | 430 | 1x57 | G.H5 | Q | 381 | G.H5.26 |
Polar | TM6 | E | 623 | 6x30 | G.H5 | Q | 372 | G.H5.17 |
Van-der-waals | TM6 | E | 623 | 6x30 | G.H5 | Q | 372 | G.H5.17 |
Hydrophobic | TM3 | I | 514 | 3x54 | G.H5 | I | 378 | G.H5.23 |
Van-der-waals | TM3 | I | 514 | 3x54 | G.H5 | I | 378 | G.H5.23 |
Hydrophobic | ICL2 | F | 518 | 34x51 | G.S3 | I | 221 | G.S3.01 |
Van-der-waals | ICL2 | F | 518 | 34x51 | G.S3 | I | 221 | G.S3.01 |
Hydrophobic | ICL2 | R | 522 | 34x55 | G.hns1 | R | 55 | G.hns1.02 |
Hydrophobic | TM5 | A | 613 | 5x72 | G.h4s6 | P | 345 | G.h4s6.20 |
Van-der-waals | TM5 | A | 613 | 5x72 | G.h4s6 | P | 345 | G.h4s6.20 |
Polar | TM6 | Q | 619 | 6x26 | G.h4s6 | P | 345 | G.h4s6.20 |
Hydrophobic | TM6 | Q | 619 | 6x26 | G.h4s6 | P | 345 | G.h4s6.20 |
Van-der-waals | TM6 | Q | 619 | 6x26 | G.h4s6 | P | 345 | G.h4s6.20 |
Hydrophobic | TM6 | L | 626 | 6x33 | G.H5 | M | 379 | G.H5.24 |
Van-der-waals | TM6 | L | 626 | 6x33 | G.H5 | M | 379 | G.H5.24 |
Polar | TM6 | R | 629 | 6x36 | G.H5 | M | 379 | G.H5.24 |
Polar | TM3 | C | 513 | 3x53 | G.H5 | N | 374 | G.H5.19 |
Hydrophobic | TM3 | C | 513 | 3x53 | G.H5 | N | 374 | G.H5.19 |
Van-der-waals | TM3 | C | 513 | 3x53 | G.H5 | N | 374 | G.H5.19 |
Hydrophobic | TM5 | V | 606 | 5x65 | G.H5 | L | 371 | G.H5.16 |
Hydrophobic | ICL2 | F | 518 | 34x51 | G.S1 | V | 58 | G.S1.02 |
Van-der-waals | ICL2 | F | 518 | 34x51 | G.S1 | V | 58 | G.S1.02 |
Hydrophobic | H8 | P | 687 | 8x49 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | H8 | P | 687 | 8x49 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | ICL1 | N | 437 | 12x51 | G.H5 | Q | 381 | G.H5.26 |
Hydrophobic | ICL2 | P | 517 | 34x50 | G.H5 | I | 370 | G.H5.15 |
Van-der-waals | ICL2 | P | 517 | 34x50 | G.H5 | I | 370 | G.H5.15 |
Aromatic | ICL2 | F | 518 | 34x51 | G.S3 | F | 223 | G.S3.03 |
Hydrophobic | ICL2 | F | 518 | 34x51 | G.S3 | F | 223 | G.S3.03 |
Hydrophobic | TM5 | S | 605 | 5x64 | G.H5 | L | 371 | G.H5.16 |
Van-der-waals | TM5 | S | 605 | 5x64 | G.H5 | L | 371 | G.H5.16 |
Hydrophobic | ICL2 | F | 518 | 34x51 | G.H5 | V | 366 | G.H5.11 |
Polar | TM5 | T | 612 | 5x71 | G.H5 | D | 368 | G.H5.13 |
Van-der-waals | TM5 | T | 612 | 5x71 | G.H5 | D | 368 | G.H5.13 |
Hydrophobic | TM6 | L | 626 | 6x33 | G.H5 | L | 375 | G.H5.20 |
Van-der-waals | TM6 | L | 626 | 6x33 | G.H5 | L | 375 | G.H5.20 |
Hydrophobic | TM3 | I | 514 | 3x54 | G.H5 | L | 371 | G.H5.16 |
Van-der-waals | TM3 | I | 514 | 3x54 | G.H5 | L | 371 | G.H5.16 |