Gq - TAS2R16 complex model

GPCR CLASS (FAMILY)

T2 (Taste 2)

SPECIES

Homo sapiens

G PROTEIN FAMILY

Gq/11

DATE

2023-09-15

3D VIEW

NGL is a WebGL based 3D viewer powered by MMTF.


Tertiary structure confidence

(pLDDT score) avg.: 82.5

Very high (>90)
Confident (90-70)
Low (70-50)
Very low (<50)
Disordered

PTM Score: 0.6
iPTM Score: 0.3
PAE mean: 22.6


GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

Gα, GPCR
Interaction cut-off: strict (stick), loose (line)

NGL is a WebGL based 3D viewer powered by MMTF.

Interaction
type		 GPCR
Segment
AA
Number		 Generic
number		 Gα
segment
AA
Number		 Generic
number
Hydrophobic TM6 A 225 6x34 G.H5 V 359 G.H5.26
Polar ICL2 W 120 34x55 G.hns1 R 38 G.hns1.03
Hydrophobic ICL2 W 120 34x55 G.hns1 R 38 G.hns1.03
Van-der-waals ICL2 W 120 34x55 G.hns1 R 38 G.hns1.03
Hydrophobic TM4 R 124 4x40 G.HN R 34 G.HN.52
Van-der-waals TM4 R 124 4x40 G.HN R 34 G.HN.52
Hydrophobic ICL2 L 116 34x51 G.S2 D 195 G.S2.07
Hydrophobic ICL2 S 109 34x44 G.s2s3 S 198 G.s2s3.02
Van-der-waals ICL2 S 109 34x44 G.s2s3 S 198 G.s2s3.02
Polar TM4 R 124 4x40 G.HN L 29 G.HN.47
Hydrophobic TM4 R 124 4x40 G.HN L 29 G.HN.47
Van-der-waals TM4 R 124 4x40 G.HN L 29 G.HN.47
Polar TM6 A 225 6x34 G.H5 L 358 G.H5.25
Van-der-waals TM6 A 225 6x34 G.H5 L 358 G.H5.25
Polar TM2 D 46 2x40 G.H5 N 357 G.H5.24
Van-der-waals TM2 D 46 2x40 G.H5 N 357 G.H5.24
Hydrophobic TM6 L 229 6x38 G.H5 L 358 G.H5.25
Van-der-waals TM6 L 229 6x38 G.H5 L 358 G.H5.25
Hydrophobic ICL2 S 109 34x44 G.s2s3 Q 197 G.s2s3.01
Van-der-waals ICL2 S 109 34x44 G.s2s3 Q 197 G.s2s3.01
Polar ICL2 W 120 34x55 G.hns1 R 37 G.hns1.02
Hydrophobic ICL2 W 120 34x55 G.hns1 R 37 G.hns1.02
Van-der-waals ICL2 W 120 34x55 G.hns1 R 37 G.hns1.02
Van-der-waals TM3 S 108 3x55 G.s2s3 S 198 G.s2s3.02
Polar TM4 R 124 4x40 G.HN K 33 G.HN.51
Hydrophobic TM4 R 124 4x40 G.HN K 33 G.HN.51
Van-der-waals TM4 R 124 4x40 G.HN K 33 G.HN.51
Hydrophobic ICL2 L 118 34x53 G.hns1 R 38 G.hns1.03
Van-der-waals ICL2 L 118 34x53 G.hns1 R 38 G.hns1.03
Polar TM4 L 123 4x39 G.hns1 R 37 G.hns1.02
Hydrophobic TM4 L 123 4x39 G.hns1 R 37 G.hns1.02
Van-der-waals TM4 L 123 4x39 G.hns1 R 37 G.hns1.02
Hydrophobic TM2 V 45 2x39 G.H5 N 357 G.H5.24
Van-der-waals TM2 V 45 2x39 G.H5 N 357 G.H5.24
Hydrophobic TM3 Y 103 3x50 G.H5 L 358 G.H5.25
Van-der-waals TM3 Y 103 3x50 G.H5 L 358 G.H5.25
Hydrophobic TM5 Q 206 5x68 G.s2s3 S 198 G.s2s3.02
Polar ICL2 F 115 34x50 G.hns1 R 38 G.hns1.03
Hydrophobic ICL2 F 115 34x50 G.hns1 R 38 G.hns1.03
Van-der-waals ICL2 F 115 34x50 G.hns1 R 38 G.hns1.03
Polar ICL2 W 117 34x52 G.HN D 35 G.HN.53
Hydrophobic ICL2 W 117 34x52 G.HN D 35 G.HN.53
Van-der-waals ICL2 W 117 34x52 G.HN D 35 G.HN.53
Polar ICL2 I 114 34x49 G.hns1 R 38 G.hns1.03
Van-der-waals ICL2 I 114 34x49 G.hns1 R 38 G.hns1.03
Polar TM3 Y 103 3x50 G.H5 Y 356 G.H5.23
Hydrophobic TM3 Y 103 3x50 G.H5 Y 356 G.H5.23
Van-der-waals TM3 Y 103 3x50 G.H5 Y 356 G.H5.23
Polar TM6 P 217 6x26 G.H5 Q 350 G.H5.17
Hydrophobic TM6 P 217 6x26 G.H5 Q 350 G.H5.17
Van-der-waals TM6 P 217 6x26 G.H5 Q 350 G.H5.17
Polar ICL2 W 120 34x55 G.HN D 35 G.HN.53
Hydrophobic ICL2 W 120 34x55 G.HN D 35 G.HN.53
Van-der-waals ICL2 W 120 34x55 G.HN D 35 G.HN.53
Polar H8 P 281 8x48 G.H5 N 357 G.H5.24
Hydrophobic H8 P 281 8x48 G.H5 N 357 G.H5.24
Van-der-waals H8 P 281 8x48 G.H5 N 357 G.H5.24
Hydrophobic ICL2 W 120 34x55 G.S3 I 200 G.S3.02
Hydrophobic TM6 T 224 6x33 G.H5 V 359 G.H5.26
Polar TM7 S 279 7x56 G.H5 N 357 G.H5.24
Hydrophobic TM7 S 279 7x56 G.H5 N 357 G.H5.24
Van-der-waals TM7 S 279 7x56 G.H5 N 357 G.H5.24
Hydrophobic TM3 V 107 3x54 G.H5 L 353 G.H5.20
Van-der-waals TM3 V 107 3x54 G.H5 L 353 G.H5.20
Polar ICL2 T 111 34x46 G.s2s3 Q 197 G.s2s3.01
Hydrophobic ICL2 T 111 34x46 G.s2s3 Q 197 G.s2s3.01
Van-der-waals ICL2 T 111 34x46 G.s2s3 Q 197 G.s2s3.01
Hydrophobic TM6 S 218 6x27 G.H5 Q 350 G.H5.17
Van-der-waals TM6 S 218 6x27 G.H5 Q 350 G.H5.17
Polar TM3 K 106 3x53 G.hns1 R 37 G.hns1.02
Van-der-waals TM3 K 106 3x53 G.hns1 R 37 G.hns1.02
Hydrophobic TM4 L 125 4x41 G.HN R 34 G.HN.52
Van-der-waals TM4 L 125 4x41 G.HN R 34 G.HN.52
Polar ICL2 R 119 34x54 G.s2s3 S 198 G.s2s3.02
Van-der-waals ICL2 R 119 34x54 G.s2s3 S 198 G.s2s3.02
Hydrophobic TM3 V 107 3x54 G.H5 L 358 G.H5.25
Van-der-waals TM3 V 107 3x54 G.H5 L 358 G.H5.25
Polar ICL1 R 41 - G.h2s4 N 222 G.h2s4.03
Hydrophobic ICL1 R 41 - G.h2s4 N 222 G.h2s4.03
Van-der-waals ICL1 R 41 - G.h2s4 N 222 G.h2s4.03
Hydrophobic TM4 R 121 4x37 G.HN R 31 G.HN.49
Van-der-waals TM4 R 121 4x37 G.HN R 31 G.HN.49
Polar ICL2 R 119 34x54 G.hns1 R 38 G.hns1.03
Hydrophobic ICL2 R 119 34x54 G.hns1 R 38 G.hns1.03
Van-der-waals ICL2 R 119 34x54 G.hns1 R 38 G.hns1.03
Hydrophobic ICL2 W 120 34x55 G.S3 R 202 G.S3.04
Van-der-waals ICL2 W 120 34x55 G.S3 R 202 G.S3.04
Polar ICL2 W 120 34x55 G.S1 E 39 G.S1.01
Hydrophobic ICL2 W 120 34x55 G.S1 E 39 G.S1.01
Van-der-waals ICL2 W 120 34x55 G.S1 E 39 G.S1.01
Polar H8 S 280 8x47 G.H5 N 357 G.H5.24
Hydrophobic H8 S 280 8x47 G.H5 N 357 G.H5.24
Van-der-waals H8 S 280 8x47 G.H5 N 357 G.H5.24
Hydrophobic ICL2 L 116 34x51 G.S3 I 200 G.S3.02
Van-der-waals ICL2 L 116 34x51 G.S3 I 200 G.S3.02
Ionic H8 R 285 8x52 G.h4s6 D 321 G.h4s6.12
Polar H8 R 285 8x52 G.h4s6 D 321 G.h4s6.12
Hydrophobic H8 R 285 8x52 G.h4s6 D 321 G.h4s6.12
Van-der-waals H8 R 285 8x52 G.h4s6 D 321 G.h4s6.12
Polar TM3 Y 103 3x50 G.H5 N 357 G.H5.24
Polar TM7 S 279 7x56 G.H5 L 358 G.H5.25
Polar TM4 R 121 4x37 G.HN R 34 G.HN.52
Hydrophobic TM4 R 121 4x37 G.HN R 34 G.HN.52
Van-der-waals TM4 R 121 4x37 G.HN R 34 G.HN.52
Polar TM3 K 106 3x53 G.H5 Y 356 G.H5.23
Hydrophobic TM3 K 106 3x53 G.H5 Y 356 G.H5.23
Van-der-waals TM3 K 106 3x53 G.H5 Y 356 G.H5.23
Ionic TM4 R 121 4x37 G.HN D 35 G.HN.53
Polar TM4 R 121 4x37 G.HN D 35 G.HN.53
Hydrophobic TM4 R 121 4x37 G.HN D 35 G.HN.53
Van-der-waals TM4 R 121 4x37 G.HN D 35 G.HN.53
Polar TM3 I 105 3x52 G.hns1 R 38 G.hns1.03
Hydrophobic TM3 I 105 3x52 G.hns1 R 38 G.hns1.03
Van-der-waals TM3 I 105 3x52 G.hns1 R 38 G.hns1.03
Hydrophobic H8 P 281 8x48 G.H5 K 354 G.H5.21
Van-der-waals H8 P 281 8x48 G.H5 K 354 G.H5.21
Hydrophobic TM2 M 43 2x37 G.H5 Y 356 G.H5.23
Hydrophobic TM6 A 221 6x30 G.H5 Q 350 G.H5.17
Van-der-waals TM6 A 221 6x30 G.H5 Q 350 G.H5.17
Polar ICL2 L 116 34x51 G.hns1 R 38 G.hns1.03
Hydrophobic ICL2 L 116 34x51 G.hns1 R 38 G.hns1.03
Van-der-waals ICL2 L 116 34x51 G.hns1 R 38 G.hns1.03
Hydrophobic ICL2 R 119 34x54 G.hns1 R 37 G.hns1.02
Van-der-waals ICL2 R 119 34x54 G.hns1 R 37 G.hns1.02
Polar TM4 R 124 4x40 G.HN R 30 G.HN.48
Hydrophobic TM4 R 124 4x40 G.HN R 30 G.HN.48
Van-der-waals TM4 R 124 4x40 G.HN R 30 G.HN.48
Hydrophobic ICL2 T 111 34x46 G.S2 D 195 G.S2.07
Van-der-waals ICL2 T 111 34x46 G.S2 D 195 G.S2.07
Hydrophobic TM2 L 49 2x43 G.H5 N 357 G.H5.24
Van-der-waals TM2 L 49 2x43 G.H5 N 357 G.H5.24
Hydrophobic ICL2 W 120 34x55 G.HN D 32 G.HN.50
Van-der-waals ICL2 W 120 34x55 G.HN D 32 G.HN.50
Polar TM7 S 279 7x56 G.H5 V 359 G.H5.26
Hydrophobic ICL2 W 120 34x55 G.HN R 34 G.HN.52
Van-der-waals ICL2 W 120 34x55 G.HN R 34 G.HN.52
Polar TM6 S 218 6x27 G.H5 D 346 G.H5.13
Hydrophobic TM6 S 218 6x27 G.H5 D 346 G.H5.13
Van-der-waals TM6 S 218 6x27 G.H5 D 346 G.H5.13
Hydrophobic TM3 F 102 3x49 G.H5 Y 356 G.H5.23
Van-der-waals TM3 F 102 3x49 G.H5 Y 356 G.H5.23
Hydrophobic TM2 V 45 2x39 G.H5 Y 356 G.H5.23
Van-der-waals TM2 V 45 2x39 G.H5 Y 356 G.H5.23
Hydrophobic ICL2 R 119 34x54 G.S3 V 199 G.S3.01
Van-der-waals ICL2 R 119 34x54 G.S3 V 199 G.S3.01
Hydrophobic ICL2 W 120 34x55 G.hns1 A 36 G.hns1.01
Van-der-waals ICL2 W 120 34x55 G.hns1 A 36 G.hns1.01
Hydrophobic TM4 R 124 4x40 G.hns1 R 37 G.hns1.02
Van-der-waals TM4 R 124 4x40 G.hns1 R 37 G.hns1.02
Ionic TM6 R 222 6x31 G.H5 D 346 G.H5.13
Polar TM6 R 222 6x31 G.H5 D 346 G.H5.13
Van-der-waals TM6 R 222 6x31 G.H5 D 346 G.H5.13