Golf -
β1-adrenoceptor complex model
GPCR CLASS (FAMILY)
SPECIES
G PROTEIN FAMILY
DATE
3D VIEW
Tertiary structure confidence
(pLDDT score) avg.: 79.9
Confident (90-70)
Low (70-50)
Very low (<50)
Disordered
PTM Score: 0.7
iPTM Score: 0.8
PAE mean: 12.0
GPCR - G protein interface interactions
The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle
(Gα residues)
and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid,
hydrophobic - dashed,
ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.
GPCR-G protein backbone (bb) or sidechain (sc):
Structures
0 structures selected.
Sequence Color
Interaction frequency filter (%)
Gα,
GPCR
Interaction cut-off: strict (stick), loose (line)
Interaction type |
GPCR Segment |
AA |
Number |
Generic number |
Gα segment |
AA |
Number |
Generic number |
---|---|---|---|---|---|---|---|---|
Hydrophobic | ICL3 | F | 265 | - | G.H4 | D | 330 | G.H4.13 |
Van-der-waals | ICL3 | F | 265 | - | G.H4 | D | 330 | G.H4.13 |
Ionic | TM5 | K | 257 | 5x71 | G.H5 | D | 368 | G.H5.13 |
Polar | TM5 | K | 257 | 5x71 | G.H5 | D | 368 | G.H5.13 |
Hydrophobic | TM5 | K | 257 | 5x71 | G.H5 | D | 368 | G.H5.13 |
Van-der-waals | TM5 | K | 257 | 5x71 | G.H5 | D | 368 | G.H5.13 |
Ionic | H8 | R | 384 | 8x51 | G.H5 | E | 379 | G.H5.24 |
Polar | H8 | R | 384 | 8x51 | G.H5 | E | 379 | G.H5.24 |
Van-der-waals | H8 | R | 384 | 8x51 | G.H5 | E | 379 | G.H5.24 |
Polar | TM6 | T | 325 | 6x36 | G.H5 | E | 379 | G.H5.24 |
Hydrophobic | TM6 | T | 325 | 6x36 | G.H5 | E | 379 | G.H5.24 |
Van-der-waals | TM6 | T | 325 | 6x36 | G.H5 | E | 379 | G.H5.24 |
Hydrophobic | TM3 | I | 160 | 3x54 | G.H5 | L | 375 | G.H5.20 |
Ionic | ICL3 | R | 264 | - | G.hgh4 | D | 310 | G.hgh4.13 |
Polar | ICL3 | R | 264 | - | G.hgh4 | D | 310 | G.hgh4.13 |
Hydrophobic | ICL3 | R | 264 | - | G.hgh4 | D | 310 | G.hgh4.13 |
Van-der-waals | ICL3 | R | 264 | - | G.hgh4 | D | 310 | G.hgh4.13 |
Hydrophobic | TM6 | R | 318 | 6x29 | G.H5 | L | 381 | G.H5.26 |
Polar | C-term | R | 443 | - | G.h2s4 | N | 226 | G.h2s4.02 |
Hydrophobic | C-term | R | 443 | - | G.h2s4 | N | 226 | G.h2s4.02 |
Van-der-waals | C-term | R | 443 | - | G.h2s4 | N | 226 | G.h2s4.02 |
Hydrophobic | TM6 | T | 325 | 6x36 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | TM6 | T | 325 | 6x36 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | TM6 | A | 322 | 6x33 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | TM6 | A | 322 | 6x33 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | TM3 | A | 159 | 3x53 | G.H5 | Y | 378 | G.H5.23 |
Hydrophobic | TM5 | A | 251 | 5x65 | G.H5 | L | 375 | G.H5.20 |
Hydrophobic | TM5 | I | 258 | 5x72 | G.H5 | L | 381 | G.H5.26 |
Hydrophobic | ICL2 | F | 164 | 34x51 | G.S3 | F | 206 | G.S3.03 |
Polar | TM2 | T | 93 | 2x39 | G.H5 | Y | 378 | G.H5.23 |
Hydrophobic | TM2 | T | 93 | 2x39 | G.H5 | Y | 378 | G.H5.23 |
Hydrophobic | C-term | W | 448 | - | G.HN | R | 36 | G.HN.51 |
Van-der-waals | C-term | W | 448 | - | G.HN | R | 36 | G.HN.51 |
Polar | TM5 | Q | 254 | 5x68 | G.H5 | R | 372 | G.H5.17 |
Hydrophobic | TM5 | Q | 254 | 5x68 | G.H5 | R | 372 | G.H5.17 |
Van-der-waals | TM5 | Q | 254 | 5x68 | G.H5 | R | 372 | G.H5.17 |
Hydrophobic | ICL2 | F | 164 | 34x51 | G.S3 | V | 204 | G.S3.01 |
Van-der-waals | ICL2 | F | 164 | 34x51 | G.S3 | V | 204 | G.S3.01 |
Hydrophobic | TM5 | V | 255 | 5x69 | G.H5 | L | 381 | G.H5.26 |
Van-der-waals | TM5 | V | 255 | 5x69 | G.H5 | L | 381 | G.H5.26 |
Polar | TM3 | D | 155 | 3x49 | G.H5 | Y | 378 | G.H5.23 |
Polar | TM3 | I | 160 | 3x54 | G.H5 | Q | 371 | G.H5.16 |
Hydrophobic | TM3 | I | 160 | 3x54 | G.H5 | Q | 371 | G.H5.16 |
Van-der-waals | TM3 | I | 160 | 3x54 | G.H5 | Q | 371 | G.H5.16 |
Hydrophobic | ICL2 | Y | 166 | 34x53 | G.H5 | H | 374 | G.H5.19 |
Aromatic | ICL2 | F | 164 | 34x51 | G.S1 | H | 43 | G.S1.02 |
Hydrophobic | ICL2 | F | 164 | 34x51 | G.S1 | H | 43 | G.S1.02 |
Van-der-waals | ICL2 | F | 164 | 34x51 | G.S1 | H | 43 | G.S1.02 |
Polar | TM5 | Q | 254 | 5x68 | G.H5 | D | 368 | G.H5.13 |
Hydrophobic | TM5 | Q | 254 | 5x68 | G.H5 | D | 368 | G.H5.13 |
Van-der-waals | TM5 | Q | 254 | 5x68 | G.H5 | D | 368 | G.H5.13 |
Hydrophobic | ICL2 | F | 164 | 34x51 | G.H5 | C | 366 | G.H5.11 |
Hydrophobic | ICL2 | F | 164 | 34x51 | G.H5 | I | 370 | G.H5.15 |
Van-der-waals | ICL2 | F | 164 | 34x51 | G.H5 | I | 370 | G.H5.15 |
Polar | TM6 | K | 321 | 6x32 | G.H5 | L | 381 | G.H5.26 |
Hydrophobic | TM6 | K | 321 | 6x32 | G.H5 | L | 381 | G.H5.26 |
Van-der-waals | TM6 | K | 321 | 6x32 | G.H5 | L | 381 | G.H5.26 |
Ionic | TM6 | K | 321 | 6x32 | G.H5 | E | 379 | G.H5.24 |
Polar | TM6 | K | 321 | 6x32 | G.H5 | E | 379 | G.H5.24 |
Hydrophobic | TM6 | K | 321 | 6x32 | G.H5 | E | 379 | G.H5.24 |
Van-der-waals | TM6 | K | 321 | 6x32 | G.H5 | E | 379 | G.H5.24 |
Hydrophobic | ICL2 | P | 163 | 34x50 | G.H5 | I | 370 | G.H5.15 |
Van-der-waals | ICL2 | P | 163 | 34x50 | G.H5 | I | 370 | G.H5.15 |
Hydrophobic | TM3 | I | 160 | 3x54 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | TM3 | I | 160 | 3x54 | G.H5 | H | 374 | G.H5.19 |
Polar | TM5 | Q | 254 | 5x68 | G.H5 | Q | 371 | G.H5.16 |
Hydrophobic | TM5 | Q | 254 | 5x68 | G.H5 | Q | 371 | G.H5.16 |
Van-der-waals | TM5 | Q | 254 | 5x68 | G.H5 | Q | 371 | G.H5.16 |
Hydrophobic | ICL3 | R | 264 | - | G.H4 | R | 329 | G.H4.12 |
Van-der-waals | ICL3 | R | 264 | - | G.H4 | R | 329 | G.H4.12 |
Hydrophobic | ICL3 | F | 265 | - | G.H4 | L | 333 | G.H4.16 |
Van-der-waals | ICL3 | F | 265 | - | G.H4 | L | 333 | G.H4.16 |
Aromatic | TM3 | R | 156 | 3x50 | G.H5 | Y | 378 | G.H5.23 |
Hydrophobic | TM3 | R | 156 | 3x50 | G.H5 | Y | 378 | G.H5.23 |
Van-der-waals | TM3 | R | 156 | 3x50 | G.H5 | Y | 378 | G.H5.23 |
Polar | C-term | A | 449 | - | G.HN | E | 29 | G.HN.44 |
Hydrophobic | C-term | A | 449 | - | G.HN | E | 29 | G.HN.44 |
Van-der-waals | C-term | A | 449 | - | G.HN | E | 29 | G.HN.44 |
Hydrophobic | ICL2 | P | 163 | 34x50 | G.H5 | H | 374 | G.H5.19 |
Hydrophobic | TM5 | I | 258 | 5x72 | G.H5 | R | 372 | G.H5.17 |
Van-der-waals | TM5 | I | 258 | 5x72 | G.H5 | R | 372 | G.H5.17 |
Hydrophobic | TM5 | Q | 254 | 5x68 | G.H5 | L | 375 | G.H5.20 |
Hydrophobic | TM5 | V | 247 | 5x61 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | TM5 | V | 247 | 5x61 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | ICL3 | F | 265 | - | G.h4s6 | T | 337 | G.h4s6.03 |
Van-der-waals | ICL3 | F | 265 | - | G.h4s6 | T | 337 | G.h4s6.03 |
Hydrophobic | TM4 | T | 171 | 4x38 | G.HN | L | 37 | G.HN.52 |
Aromatic | ICL2 | F | 164 | 34x51 | G.H5 | F | 363 | G.H5.08 |
Hydrophobic | ICL2 | F | 164 | 34x51 | G.H5 | F | 363 | G.H5.08 |
Van-der-waals | ICL2 | F | 164 | 34x51 | G.H5 | F | 363 | G.H5.08 |
Hydrophobic | ICL2 | P | 163 | 34x50 | G.H5 | R | 367 | G.H5.12 |
Hydrophobic | TM6 | L | 326 | 6x37 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | TM6 | L | 326 | 6x37 | G.H5 | L | 380 | G.H5.25 |
Polar | TM3 | A | 159 | 3x53 | G.H5 | H | 374 | G.H5.19 |
Hydrophobic | TM3 | A | 159 | 3x53 | G.H5 | H | 374 | G.H5.19 |
Van-der-waals | TM3 | A | 159 | 3x53 | G.H5 | H | 374 | G.H5.19 |
Hydrophobic | ICL2 | F | 164 | 34x51 | G.H5 | R | 367 | G.H5.12 |
Van-der-waals | ICL2 | F | 164 | 34x51 | G.H5 | R | 367 | G.H5.12 |
Hydrophobic | TM5 | I | 258 | 5x72 | G.h4s6 | Y | 345 | G.h4s6.20 |
Van-der-waals | TM5 | I | 258 | 5x72 | G.h4s6 | Y | 345 | G.h4s6.20 |
Hydrophobic | TM3 | I | 160 | 3x54 | G.H5 | Y | 378 | G.H5.23 |